Salvelinus namaycush (lake trout): 120047157
Help
Entry
120047157 CDS
T07522
Name
(RefSeq) PHD finger protein 1-like
KO
K11467
PHD finger protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120047157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120047157
03036 Chromosome and associated proteins [BR:
snh03036
]
120047157
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120047157
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120047157
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
Chromo
ASH2L-like_WH
DUF4537
Motif
Other DBs
NCBI-GeneID:
120047157
NCBI-ProteinID:
XP_038848619
UniProt:
A0A8U0UCK3
LinkDB
All DBs
Position
Sna5:48990199..49003452
Genome browser
AA seq
521 aa
AA seq
DB search
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFSVGVEE
VCCICDAPPLKEPLINCLKCRHGYHPECHTPSIEPEADSNSWICRQCVFAVATKRGGAIK
RGRFARLMQIMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYEFQCSVCANGPETIQRLPMSWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFANENWDSLLLGSLSDTPRQDRCHNLLNALNSNKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPINITQRRSPLSLPCQRRAVGPESRKSKRRIMETQPCPPPVP
ATPIDLVPCCHGYVGGTNLYNSRKEEELNLGSPPKRMFALYHPTYNGAPAISRTLHHYSA
EDPCRVPPPCLPFSLSSSHHHNHNHHQQHHQHQPGQKLDPCPSLMLRDVPSYPGGVGGGG
GGDGSAARGWGGGDGVRILARRVTPDGKVQYLVEWGNMSVY
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggggggagtaagtgaaggggatgatgtgttagctcgatggagtgatggactactgtac
ctcggcaatgtgaagagagtagatggagtcaagcaatgttgtctggtgagatttgaggac
aactcggaattctgggtcctaagaaaagacattcactctttctcagttggagtggaagaa
gtttgctgtatctgtgatgccccgcctcttaaagaacctctcatcaattgtcttaaatgt
cgtcacggttatcatcctgagtgccacactccatccattgagccggaagctgacagcaat
tcttggatatgtcggcaatgtgtctttgcagtggcgaccaagagagggggagccatcaaa
cgaggacggtttgcccggctcatgcaaatcatgaaacttcggctgccctatcagctgtca
tctttagactgggacccacagcatctgaccaatcagcagcagtgttactgctactgtgcc
ggacctggagagtggaacttgaaaatgttgcagtgtggaagttgtggtcagtggtttcat
gaagcttgcacacagtgtctgaccaagccgttgttatatggagacaggttttatgagttc
cagtgctcagtctgtgcaaacggaccagagacaattcaacggctacccatgagctgggta
gatttggcccatttggtgctctaccacctctccttgtgctgcaagagaaaatactttgat
ttcgaccatgaaatcatgtcgtttgccaatgagaattgggactctttgcttctaggctcg
ctctctgacacaccaaggcaagatcgctgtcacaatctgctcaacgctttgaactccaac
aaagacaggtttgtctctggtaaagagatcaagaagaagaagtgtctttttgggctccag
gtccgagctccgcctcccctgacctctgattcgtcccccctcatcactgacccgcccatc
aacatcacccaaaggagaagcccattgtcactgccctgccagaggagagcggtggggcca
gagtcacgcaaatcaaagcggcgcatcatggagacacagccttgtccgcccccggtccca
gccaccccaatagatctggtgccatgttgccatggctacgtaggtggaactaacctctac
aactccaggaaggaggaggagctgaatttgggctctccacctaagaggatgtttgccctg
tatcaccccacctataacggagccccagccatctccagaaccctgcatcactatagtgcg
gaagacccttgtcgagtgccgcccccctgcctccccttctccctgtcatcctcccaccat
cacaaccacaaccaccaccagcagcaccaccagcaccagcctggccagaagttggatccc
tgcccctccctcatgctgcgtgacgtcccttcctatccgggcggcgtggggggagggggt
gggggggatgggtcagctgccaggggctgggggggcggggacggggtgaggattttggcg
aggcgagtaacgccagacgggaaggtccagtacctcgtggagtgggggaacatgagtgtg
tactga
DBGET
integrated database retrieval system