KEGG   Salvelinus namaycush (lake trout): 120047157
Entry
120047157         CDS       T07522                                 
Name
(RefSeq) PHD finger protein 1-like
  KO
K11467  PHD finger protein 1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120047157
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:snh03000]
    120047157
   03036 Chromosome and associated proteins [BR:snh03036]
    120047157
Transcription factors [BR:snh03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    120047157
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     120047157
SSDB
Motif
Pfam: Tudor_2 PHD Mtf2_C PHD_ash2p_like PHD_2 Chromo ASH2L-like_WH DUF4537
Other DBs
NCBI-GeneID: 120047157
NCBI-ProteinID: XP_038848619
UniProt: A0A8U0UCK3
LinkDB
Position
Sna5:48990199..49003452
AA seq 521 aa
MGGVSEGDDVLARWSDGLLYLGNVKRVDGVKQCCLVRFEDNSEFWVLRKDIHSFSVGVEE
VCCICDAPPLKEPLINCLKCRHGYHPECHTPSIEPEADSNSWICRQCVFAVATKRGGAIK
RGRFARLMQIMKLRLPYQLSSLDWDPQHLTNQQQCYCYCAGPGEWNLKMLQCGSCGQWFH
EACTQCLTKPLLYGDRFYEFQCSVCANGPETIQRLPMSWVDLAHLVLYHLSLCCKRKYFD
FDHEIMSFANENWDSLLLGSLSDTPRQDRCHNLLNALNSNKDRFVSGKEIKKKKCLFGLQ
VRAPPPLTSDSSPLITDPPINITQRRSPLSLPCQRRAVGPESRKSKRRIMETQPCPPPVP
ATPIDLVPCCHGYVGGTNLYNSRKEEELNLGSPPKRMFALYHPTYNGAPAISRTLHHYSA
EDPCRVPPPCLPFSLSSSHHHNHNHHQQHHQHQPGQKLDPCPSLMLRDVPSYPGGVGGGG
GGDGSAARGWGGGDGVRILARRVTPDGKVQYLVEWGNMSVY
NT seq 1566 nt   +upstreamnt  +downstreamnt
atggggggagtaagtgaaggggatgatgtgttagctcgatggagtgatggactactgtac
ctcggcaatgtgaagagagtagatggagtcaagcaatgttgtctggtgagatttgaggac
aactcggaattctgggtcctaagaaaagacattcactctttctcagttggagtggaagaa
gtttgctgtatctgtgatgccccgcctcttaaagaacctctcatcaattgtcttaaatgt
cgtcacggttatcatcctgagtgccacactccatccattgagccggaagctgacagcaat
tcttggatatgtcggcaatgtgtctttgcagtggcgaccaagagagggggagccatcaaa
cgaggacggtttgcccggctcatgcaaatcatgaaacttcggctgccctatcagctgtca
tctttagactgggacccacagcatctgaccaatcagcagcagtgttactgctactgtgcc
ggacctggagagtggaacttgaaaatgttgcagtgtggaagttgtggtcagtggtttcat
gaagcttgcacacagtgtctgaccaagccgttgttatatggagacaggttttatgagttc
cagtgctcagtctgtgcaaacggaccagagacaattcaacggctacccatgagctgggta
gatttggcccatttggtgctctaccacctctccttgtgctgcaagagaaaatactttgat
ttcgaccatgaaatcatgtcgtttgccaatgagaattgggactctttgcttctaggctcg
ctctctgacacaccaaggcaagatcgctgtcacaatctgctcaacgctttgaactccaac
aaagacaggtttgtctctggtaaagagatcaagaagaagaagtgtctttttgggctccag
gtccgagctccgcctcccctgacctctgattcgtcccccctcatcactgacccgcccatc
aacatcacccaaaggagaagcccattgtcactgccctgccagaggagagcggtggggcca
gagtcacgcaaatcaaagcggcgcatcatggagacacagccttgtccgcccccggtccca
gccaccccaatagatctggtgccatgttgccatggctacgtaggtggaactaacctctac
aactccaggaaggaggaggagctgaatttgggctctccacctaagaggatgtttgccctg
tatcaccccacctataacggagccccagccatctccagaaccctgcatcactatagtgcg
gaagacccttgtcgagtgccgcccccctgcctccccttctccctgtcatcctcccaccat
cacaaccacaaccaccaccagcagcaccaccagcaccagcctggccagaagttggatccc
tgcccctccctcatgctgcgtgacgtcccttcctatccgggcggcgtggggggagggggt
gggggggatgggtcagctgccaggggctgggggggcggggacggggtgaggattttggcg
aggcgagtaacgccagacgggaaggtccagtacctcgtggagtgggggaacatgagtgtg
tactga

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