Salvelinus namaycush (lake trout): 120050491
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Entry
120050491 CDS
T07522
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120050491
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120050491
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Zip
SieB
Motif
Other DBs
NCBI-GeneID:
120050491
NCBI-ProteinID:
XP_038853006
UniProt:
A0A8U0UIJ1
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Position
Sna7:47524789..47557410
Genome browser
AA seq
2027 aa
AA seq
DB search
MAQLLVPPGPDSFCRFCPDSLAAIERRITEEEARKPRVDRCSDSNDDNEPKPNSDLEAGK
SLPFIYGDVPQGFVSTPLEDLDPFYSNQKTFIVLNRGKAIFRFNATPACYILSPFNPLRR
IAIAVLVHSMFSMLIMFTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFMVISMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCIRNLVNDTTTDDRLNRTLGTPD
LNGTDFNGTDFNITSSVNWTEYINNESNYYYLPNRRDALLCGNGSGAGLCPEGFTCIKAG
RNPDYNYTSFDSFGWAFLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLV
NLILAVVAMAYDEQNQATIEEAAQKEEEFQAMLEQLKRQQEEALVAVAAATESHGEYSER
GGPSTEASSGTSKLSSKSAKERMNHQKKRKERGEHKKFHKSESEDSTKRLSFRFSIDANR
LSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDVVSDNDFADDEQSTFEDTD
SRRGSLFVPCRIERRSSTVSQTSLAPQRVLLPSNGKMHCTVDCNGVVSLVGGTSVPTSPV
GLLLPERTTTDSEMRLKKRRSRQASMSYLDEPDRARARAMSVASILTNTMEELEESRQKC
PPCWYKFANTYLIWDCCPMWLSFKGIVNTVVMDPFVDLAITVCIVLNTLFMAMEHYPMTK
EFNHVLSVGNLVFTGIFTAEMGFKLIALDPYYYFQQGWNIFDGIIVSLSLMELGLANVEG
LSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGK
SYKECVCKIADNCQLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFMM
VMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRIQRGVAWVKVAIRQVI
QSLFLGGGATKGVKGGSLEGGKTLDELHSSINGKGGNCNSKHMLVEITKDPSGVYLKEGN
GRPGGGLGVGLGDSTENYPKEECNYMSFIHNPSLTVSVPIAVCESDFETTITEDFSSDSA
SEEMSMGSKEKLPIEPQHLISSEGSSVDIGPPGDGAESVELEDEESEDPENCFTDGCVLR
FQCCQVNVEEGKWKMWWTLRKTCFIIVEHNWFETLIIFMILLSSGALAFEDIYIEQRKTI
KIVLEYADKVFTYIFILEMLLKWVAYGFKKYFTNAWCWLDFLIVDVSLVSLVANALGYSE
LSAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNL
FAGKYYYCVNTTNDETFPIEVVNNKSDCLALANDSARWKNVKINFDNVGAGYLALLQVAT
FKGWMDIMYAAVDSRNVELQPQYEQNLYMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQK
KKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPTNAFQGCVFDFVTKQAFDIVIMIL
ICLNMVTMMVEEDDQTPERENILHWINFVFIVLFTGECTLKIISLRHYYFTIGWNVFDFV
VVILSIVGMFLSELIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYAIFGMSNFAYVKHEAGIDDMFNFETFGNSMLCLFQITTSAGWDGLL
APILNKKEPDCDSQMEHPGTLYRGNCGNPPVAMFFFVSYIIICFLIVVNMYIAVILENFS
VATEESADPLSEDDFEMFYEVWERFDPDATQFVEYHKLSDFADALDPPLRMAKPNHIQLI
KMDLPMVSGERIHCLDILFAFTKRVLGEGEGLDLLRGQMEERFMASNPSKVSYEPITSTL
RRKQEDMSALVIQRSFRRYLARLALKKAAELYKKQPKGSVMYELEDKEVLVIGQSADNST
LTEKTDMTPSTASLPSYNSATNLEKDQYEKEKREKENRDKDLREQNK
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttctgccgcttctgtcccgactcg
cttgccgccatcgaaaggcgcatcaccgaggaggaggcccggaaaccccgcgttgaccgc
tgtagcgacagcaatgacgacaacgagcccaagcccaacagcgacctggaggcggggaag
tccctccccttcatctacggggacgtcccacaaggctttgtctccacccctctggaggac
ctggaccccttctactccaatcagaagacatttatagtattgaatcgcggcaaggcaata
ttccgtttcaacgccactcctgcctgttacatcctaagccccttcaatcctctacggaga
atagcaattgcagttttagtacactcgatgttcagcatgttgatcatgttcaccattctg
accaactgtgcttttatgactctgagcaaccccccggactgggccaagaatgttgagtac
acattcacagggatttacacattcgagtctctcattaaaatcttggcgagggggttctgt
gtggggaagttcaccttcctcagggatccatggaactggttggacttcatggtaatctcc
atggcgtatgtaacagagtttgtaaacctaggcaatgtttcagctctgcgcactttcaga
gtattgcgagctttgaaaactatctcggtaatcccaggactaaagaccatcgtgggcgct
ctgatccagtcggtcaagaagctctccgacgtcatgatcctcaccgttttctgtctcagc
gtcttcgccctgattggcctgcagctcttcatgggaaacctgaggcagaagtgtatccgc
aacctcgtcaatgacacgaccaccgacgaccgcctgaacagaactctgggaactccagac
ttaaatggaaccgatttcaatggaaccgatttcaacatcactagctccgtgaactggact
gagtacatcaacaatgagagtaattactattacctccccaaccgcagggacgccctcctc
tgtgggaatggcagtggagccgggttgtgcccagagggattcacgtgcatcaaggcgggc
aggaacccagactacaactacacaagcttcgactcatttggctgggccttcctgtccctg
ttcagactcatgacccaggacttctgggaaaacctctaccaacagaccctgcgagcggcg
gggaagccctacatgatcttctttgtgttggtgatcttcctgggttccttctacctggtc
aacctgatcctggctgtggtggccatggcctacgatgagcagaaccaggccaccatagag
gaggcagcccagaaggaggaggagttccaggctatgctggagcagctcaagagacagcag
gaggaggcattggttgccgtggcagcagccacagagagccacggagagtacagcgagaga
ggggggccctccacagaagcctcctcagggacctccaaactcagctccaagagcgccaag
gagagaatgaaccatcagaagaagagaaaagagaggggcgagcacaagaagttccacaag
tccgagtcggaggacagtaccaagaggttaagcttccggttttcgatagatgccaaccgg
ctgtcctacgagaagagatgctcctcacccaaccagtctctcctcagtatccgcggctcc
ctcttctccccgaggaggaacagccgagctagcctgtttagcttccgaggccgcgcccgc
gatgtggtctccgataacgacttcgccgatgacgagcaaagcacgttcgaggacaccgac
agccgccgcggctccctgtttgtgccttgccgtatcgagcgccgctccagcacggtgagt
cagactagcctggcccctcagcgcgtcctgctgccctccaacggcaagatgcactgcacc
gtggactgtaacggcgtcgtctcgctagtgggagggacctcggtgcccacctcgcctgta
ggactgctcctgcctgagaggacaaccactgactctgagatgaggctgaagaagaggagg
tctcgccaggcttccatgtcctacctagatgagccagacagagccagagccagagctatg
agtgtggccagtattctcaccaacacaatggaggagcttgaagagtccaggcagaagtgt
ccaccatgctggtataagtttgccaacacctatctgatctgggactgctgtcctatgtgg
ttgagtttcaaggggatcgtcaacacagtggtgatggaccccttcgtggacctggccatc
accgtctgtatcgtcctcaacaccctcttcatggccatggaacattatcccatgaccaag
gagttcaatcatgtcctctctgtcgggaacttggtgtttacaggcatcttcacggctgag
atgggtttcaagctaatcgctctggacccctactactactttcaacagggatggaacata
tttgacggcatcatcgtcagtctgagtctgatggaactcggcctggccaatgtagagggc
ctgtctgtgctccggtctttccgattgttgagggtgttcaagctggccaagtcttggccc
accctgaacatgctgatcaagatcatcggtaactcggtgggagcgctgggtaatttgaca
ctggtcctagccatcatcgtgttcatcttcgccgtggtgggcatgcagctgttcggcaag
agctacaaggagtgtgtgtgtaagatcgcagacaactgccagctgccgcgctggcacatg
catgacttcttccactcgttcctcatcgtgttccgggtgctgtgtggggagtggatcgag
accatgtgggactgtatggaggtggctggccagagcatgtgcctcatcgtttttatgatg
gtcatggttatagggaacctggtggtcctgaatctgttcctggccttgctgctcagctcc
ttcagcgccgacaacctggcggccacggacgacgacagcgagatgaacaacctgcagatc
gctgtgggccgcatccagaggggcgtggcctgggtcaaggtggccatccgccaggttatc
cagagccttttcctcgggggcggagccaccaaaggggtcaagggggggtcactggagggg
ggtaagaccctggacgagctccacagctccatcaacggcaaggggggcaactgcaactca
aaacacatgttggtcgagatcactaaagatccgagtggggtctatctgaaggaggggaac
gggcggcccggaggggggttgggggtggggttaggagacagtacggagaattacccaaag
gaggagtgcaactacatgtcgttcatccacaaccccagcctgacggtgagcgtgcccatc
gcggtgtgcgaatcggactttgagaccactatcacggaggacttcagcagcgactcggcc
tccgaggaaatgtcgatgggcagcaaagagaagctacctatagagccccagcaccttatc
tcatcggagggcagctcggtggatatcggtcccccgggggatggagctgagtcagtggag
ctggaggacgaggagtcagaggacccagagaactgcttcactgatggctgtgtgctcagg
ttccagtgttgccaggtgaacgttgaggagggcaagtggaagatgtggtggaccttgagg
aagacgtgcttcatcatcgtggaacacaactggttcgagaccttaatcattttcatgatc
ctgctcagcagtggcgctctggcgtttgaagacatttacatagaacagcggaagaccatt
aaaattgtgctggagtacgcagacaaagtcttcacctatatcttcatcctggagatgctg
ctgaagtgggtggcctatggattcaagaagtacttcaccaacgcctggtgttggctggac
ttcctcattgttgatgtgtctctggtgagcttggtagccaatgcgttaggctactctgag
ctgagtgccattaaatccctacgaacactgcgggccttaagacccctgagggccttgtca
cggttcgagggcatgagggtggtggtgaacgccctcctgggtgccattccgtccatcatg
aacgtgctgctggtgtgcctcatcttctggctcatcttcagcatcatgggcgtcaacctg
ttcgcagggaagtactactactgcgtcaacaccaccaacgacgagacctttcccatcgag
gtggtcaacaacaagagtgactgtctggccctggccaatgacagcgcccgatggaagaat
gtcaagatcaactttgataatgtcggggccgggtacttggccttgttgcaagtggcaacg
tttaaaggttggatggacatcatgtatgcagctgtggactctcgtaatgtggaacttcag
ccccaatatgaacagaacctctacatgtatctgtactttgtcatcttcatcatctttggc
tccttcttcactctcaacctcttcattggtgtcatcattgacaacttcaaccaacagaag
aaaaagtttggaggtcaggacatcttcatgacagaggaacaaaagaaatactacaatgcc
atgaagaagctcggctccaagaaaccccagaagcctattcccaggccaacgaatgcattc
caaggctgtgtgtttgacttcgtaacgaagcaggcttttgacattgtcatcatgatcctc
atctgcctcaacatggtcactatgatggtggaagaggacgaccagacaccagagagggaa
aatatcctccactggattaactttgtctttatagtgctctttactggggagtgtacgctc
aaaattatatccctccgccattactacttcacaattggctggaacgtgtttgactttgtc
gttgtcatcctttcaatcgtaggtatgtttttatcagaattgattgagaagtactttgtt
tccccaacgttattccgagtcatccgacttgccagaatcggccgcatcctccgtctcatc
aagggcgctaagggcatccggacgcttttgttcgccttgatgatgtcacttcctgccctg
tttaacattggcctcctgctcttcctggtcatgttcatctacgccatcttcggcatgtcc
aacttcgcctacgtcaagcacgaggcgggaatcgacgacatgttcaacttcgagacgttc
ggcaacagcatgctctgcctgttccagatcaccacgtcggcgggctgggacggcctcctg
gcgcccatcctcaacaagaaggagcccgactgtgacagccagatggagcacccaggcacc
ttgtaccggggaaactgcggcaacccgccagtggccatgttcttcttcgtcagctacatc
atcatctgtttcctcatcgtggtcaacatgtacatcgccgtcatcctcgagaacttcagc
gtggccaccgaggagtcggccgacccgctgagcgaggatgactttgagatgttctacgag
gtgtgggagcgcttcgacccggacgccacgcagttcgtggagtaccacaagctgtcggac
tttgcagacgcgttggacccgccgctgcgaatggccaagcccaaccacatccagctgatc
aaaatggatctgcccatggtcagcggggagcgcatccactgccttgacatcctgtttgcc
ttcaccaagcgtgtcctgggagagggcgaaggcttggacctcctccggggccagatggag
gagcgcttcatggcctccaacccctccaaagtctcctatgaacccatcaccagtaccctg
cggcgcaagcaggaagacatgtctgccttggtgatccagaggtcattcaggcgctacctg
gcccgactcgctctgaagaaagcagcagagctctacaagaagcagcctaaaggcagtgtg
atgtatgagctggaggacaaggaggtgctggtgataggacagtccgcggacaactccacc
ctcactgagaaaacggacatgacgccctccaccgcctcgctgccttcgtacaacagtgcc
acaaatttggaaaaggaccaatatgagaaagaaaagagggagaaagagaacagagacaaa
gatctgagagagcaaaataaataa
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