Salvelinus namaycush (lake trout): 120053596
Help
Entry
120053596 CDS
T07522
Name
(RefSeq) ubiquitin-protein ligase E3A-like isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120053596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120053596
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120053596
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120053596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
120053596
NCBI-ProteinID:
XP_038856661
UniProt:
A0A8U1BM18
LinkDB
All DBs
Position
Sna9:complement(3735292..3772706)
Genome browser
AA seq
849 aa
AA seq
DB search
MKRAAAKHLIERYFRQLTEGCGNGACTNELCASCLGFQPLDHNTAAIRALELYKINTKLC
DLHPSAAFPDNNSAEDTQPALLGDRHGKMTDNLFPPREDFRDVHYLTEEKVYEILSICEG
KKDYSPLIRVIGRIFSSADGLVRSFRKDKEQHPNTKEQRKTHQAKDEDKDEDDKERTTAM
EQESEASASMEGATGSTENRLGPVEVSVDIEAVRRVYDRLLSNETMESAFLNALVYLTPN
VELDLTYLDVYDTNPDYLNIFVIVMENSSLHSPEYLEMAMPLFCKCMSKLPLPALAKLTR
LWSRYSVEHIRRMMETFQQLITYTVISNDYDSDSLVNDDEGVVAATKCLKLVFYANVLGG
DLDTGHNEEEEEEPPSESSELTLQELLGEERRNKKGLRVDPLEKELGVRTLDCRRPLIPF
EEFVNEPLNDVLEMDKDFTFFKVDSESKFSFQSCPFILNACTKSLGLYYDNRISMYSERR
ITALYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMISMENPADLRKQLFVEFEGEQGVD
EGGVSKEFFQLVLEEMFNPDIGMFTYDESTKLFWFNPSSLENEAQFTLIGIVLGLAIYNN
CILDVHFPMVVYRKLMGKKGTYLDLADSHPVQYQSLKELLDYEGDVEEDMMITFQISQTD
LFGDPITYDLKENGDKIPVNVDNRKEFVSLYGDYILNKSVERQFKAFRRGFQMVTNESPL
NCLFRPEEVELLICGSRNLDFHALEETTEYDGGYNKDCRIIKDFWETVHSFGEEDKRLFL
QFTTGTDRAPVGGLGKLKMIIAKNGPDTDRLPTSHTCFNALLLPEYDTKEKLKERLLKAV
TYAKGFGML
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagcggctgcaaagcatctaattgagcgctactttcgccagttaacagagggc
tgtggaaatggggcctgcacgaatgagttgtgtgcttcgtgtcttggttttcaaccgctg
gatcacaacacggcggccatcagagccctggagctctataaaattaacaccaaactgtgt
gaccttcacccctccgctgccttccctgacaacaacagtgccgaggacacacaacctgcc
ttattgggcgaccgccacgggaagatgacagacaacctgtttccccctagggaagacttc
agagatgtgcattacctgaccgaggagaaggtgtatgagatcctgagtatctgtgagggt
aagaaggactactctcctctgatccgagtcatcgggaggatcttctccagcgctgacggt
ctggtgcggagcttcaggaaagacaaggagcaacaccccaacaccaaggagcagcgtaag
acccaccaggccaaagacgaggacaaggacgaggacgacaaggagagaaccaccgccatg
gagcaggaatcagaggcctcagcgtccatggaaggagcgacgggatcgacggagaacaga
ctgggtcctgtggaggtctcagtggacatagaagctgtgaggagagtgtacgacagactc
ctctccaacgagacgatggaatcagccttcctcaacgccctggtctacctaactcccaac
gtagagctggatctaacctatctggacgtgtacgacaccaacccagactacctgaacatc
ttcgtcatcgtgatggagaacagcagcctccacagcccagagtacctggagatggccatg
cctctgttctgtaagtgtatgagtaaactccctctgcctgccctggccaagctgacgcgc
ctgtggtctcggtacagtgtagagcacatcaggcgtatgatggagaccttccagcagctc
atcacctacacggtgatcagcaacgactacgacagcgacagtctggtaaacgatgacgag
ggcgttgtggcggccaccaagtgtctgaagctggtgttctacgccaacgtgctgggaggt
gacctcgatacgggccacaacgaagaggaggaggaggagcccccgtctgagtccagcgag
ctcaccctgcaggagctcttaggggaggagaggaggaacaagaagggtctccgggtcgat
cctctggagaaggagctgggcgtcaggaccctggactgcagacgacccctcatccccttc
gaggagtttgtcaacgagccgttgaacgatgttctagagatggacaaggactttaccttc
ttcaaggtggactcggagagtaagttctccttccagagctgtcccttcatcctcaacgcc
tgcaccaagagcctgggtctgtactacgacaaccgcatcagcatgtacagcgagaggagg
atcacggcgctctacagcctggtacaagggcagcagctcaacccgtacctcaggctcaaa
gtacgacgagaccacatcatcgacgacgccctcgtcaggttagagatgatctccatggag
aacccagcggacctgaggaagcagctgtttgtggagtttgaaggcgagcagggcgtcgac
gagggaggagtctctaaagagttcttccagctagtcctggaggagatgttcaaccctgat
attggcatgtttacgtatgatgagtccaccaagctgttctggttcaacccgtcctctctg
gagaatgaggcccagttcaccctgatcggcatcgtcctgggcctggccatctacaacaac
tgcatcttggatgttcacttccccatggtggtctacaggaaactgatggggaagaaaggg
acctatcttgacctggcagactctcacccggttcagtaccagagtctgaaggagctgctg
gactatgagggcgacgtggaggaggacatgatgatcaccttccagatctcacagactgac
ctgtttggagaccccatcacttacgacctgaaggaaaacggggacaagatacctgttaat
gtggacaatagaaaggagtttgtgtctctgtatggcgattacatccttaataagagtgtg
gagcgccagttcaaagccttcaggaggggcttccagatggtcaccaacgagtctcctctc
aactgtttgtttagacctgaagaggtggagctactcatctgtggaagcaggaatttagac
tttcacgcacttgaagaaacaaccgagtatgacggaggctacaacaaagactgtcgcatt
atcaaagacttctgggagacggtgcattcgtttggtgaggaggataagagacttttcctc
cagtttacgacggggactgacagagcacccgtaggaggcctgggcaagttaaagatgatc
atcgccaagaacggccccgacacagacaggttacctacttctcacacgtgttttaatgcc
ttgctgctcccagaatacgacacaaaggagaagctgaaggagagacttctcaaagccgtc
acttacgccaaaggatttggaatgttgtga
DBGET
integrated database retrieval system
