Salvelinus namaycush (lake trout): 120056079
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Entry
120056079 CDS
T07522
Name
(RefSeq) complement C3-like isoform X1
KO
K03990
complement component 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04145
Phagosome
snh04518
Integrin signaling
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120056079
04518 Integrin signaling
120056079
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120056079
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120056079
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120056079
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120056079
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120056079
Peptidases and inhibitors [BR:
snh01002
]
Peptidase inhibitors
Family I39: alpha2M family
120056079
Membrane trafficking [BR:
snh04131
]
Endocytosis
Phagocytosis
Opsonins
120056079
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
120056079
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M_BRD
A2M
A2M_recep
MG1
MG4
MG2
ANATO
MG3
NTR
C3_CUB2
TRAPPC13_C
Filamin
Motif
Other DBs
NCBI-GeneID:
120056079
NCBI-ProteinID:
XP_038860158
UniProt:
A0A8U1ENL0
LinkDB
All DBs
Position
Sna11:complement(33940663..33995982)
Genome browser
AA seq
1643 aa
AA seq
DB search
MGCSKLLAALLLILSLCCSSLGQTYIMVAPNILRVGSEESIYLESSVGGEVNLIVMDFPL
KRSKLYEKKQILGDNNQALHQLKLDQKDFNRNVRGNQYVHLKATFGGRQLETVVLVSFQS
GYVFLQTDKPIYNPGEDVKYRLFVTNLEAKAANGIVSVGLKSVDGTIISQTKMGLSVNGL
YANQFLLPDIVKEEGTWTLEVKLQSEPDRVFNTSFDVKKHVLPTFEVTLKTRKQYLHVQD
QDFKVDLEARYFSGTEVVGYAYVMFGYVCKNGTKIQLSTLLQRHQLQTGTTTAILTVAQI
IAAAKDVNSIDDILECSLYARATVFTSSGSDIVTAELTGIKVVTSPYSIHFTKSSKFFKP
GLPFNLHVYLTDTSGSPVKGIEIEREGQKYFTDSHGIAVITINTVRTDKKKNVQVTTAVS
DLLDSSHQARKDITLLAYETKTVKEYIHLSVDKSVVKKDESLYVAINFLGENGAQVFQHD
FISYMVVSKGRIIEMGKWNSKDKALLKETLKVTPDMLPSFRLVAFYIVPSQGYDVVADSL
WVDVEDQCMGQLKLSIKKSNKRLDFRPREEFSLNVEGDPGAKVGLVVVDKAAYMLSKKGN
LTQAKIWDEVERSDKGCTRGGGRNNMAIFSDAGLLFESNQEKTAPRQRFSCDTEVPKRRR
EAKSLQDAKNELAIQCEKDVNRCCHDGMMDFPLDYSCEKRSHYITEGPKCVEAFLRCCQG
IQKDKIRFTTPELILARKANEDFFDEDEEDIIIRSKFDVSWMWTTILLSDKETDAGIVTH
EKTNMVLQDSITQWMVLGISTSETKGVCVAEPVEMTVVKNFYVDLRLPYSVVNREQVQIK
VVIHNYDEDSQKVTVLLKASEGLCTATNYRGSYKEIVNVDKKSQKVLYFTVIPMKPGKHQ
ITVTARSEYYRDGIEKQLLVVPEGVEKTELKKRILQPDFMNGKQTGEVYINLKNMLPDTV
SSTYIAIEGDSLADTVINSIGGAVLSKLIKMPGGCVEQNLVSMTAPIIATHYLDHANAWE
EVGVERRAEALKYVDQGYQRHLGYRNSDDTYSPYGKGGIPSTWVTAYTAKVFAMVYMFGV
VEDIRVCKPLKFLVKQQNSAGTFQEDAPIKHWEITGGLYKEGDVATTAFVLIAMQETLGI
CKDIDTDLDGAMKKASDYIFNALPAQSSPYSVAISSYALALTKKSEWKDKLLKELDRTST
EGTHWGGNDDKGVEATGYALSALVTLGELKRSEAVSDWLVAKSRANGQFGNTQCTIVVFQ
ALSLFQKQKPAPPGNDISVSLSVNSPVRTGQSSSIKWNLDQRSRFMSRSERIPQLTDFTF
EAKGSGKAKLKVLTTYYAMLVKEQSVCKGFNMSHSIEKINEAKAPEGVVGVYKLTICVRP
LEGTSNKMAILDVSLPSGFVPDYTSLNELLSRKDKLIHFYQLDKELSDKGSLIIHIYDLS
PSPNSDYCVPVTLYQEFTVRLLQPSSIKVYSYYQSEKSCTRFYSPFKNSTDEDIICSKNG
CACIDKNCPSVKKAESLTASDREEEACVWTNPVYNIKVKHIQEDENTLIKYKMEIQKAYK
LGNDLKVDVKTERDFYAHRMCQTSLGLKKDKLYLFIGNPKDIILGDDGSYSYVLSGNTWL
EEFESGGEQATFLNKLETSGCST
NT seq
4932 nt
NT seq
+upstream
nt +downstream
nt
atggggtgttcaaagctccttgcagctctccttctcatcctctccctctgctgttcatct
ctgggtcaaacgtacataatggtggccccaaacatccttcgggttggcagtgaggagagc
atatacttggagagctcagtgggtggtgaggtgaaccttattgtgatggactttcctttg
aaaagatctaagctctatgaaaaaaaacagatccttggagacaacaaccaggctctgcat
cagctaaagcttgatcaaaaagacttcaatagaaatgttagaggcaatcagtatgtgcac
ctgaaagcaacattcggaggcagacaattggagacagttgttttggtgtccttccagtca
ggttatgtcttcctccagacagataaacctatctataaccctggagaggacgttaagtac
aggctatttgtcacaaaccttgaagcaaaggcagcaaacggtattgttagtgttggttta
aagagtgttgatggcactataatctcgcagaccaaaatgggtctgagtgtcaatggactt
tatgccaaccaatttttgctcccagatatagtcaaggaggaaggaacgtggaccctggag
gtgaaattacagagtgaacctgacagggtctttaacacctcatttgatgtgaagaaacat
gtgttgccaacatttgaggtcacattgaaaaccaggaagcagtatttacatgttcaggac
caagactttaaagtggatttagaagctaggtacttctctggaacggaggttgtaggctat
gcatatgtcatgtttggatatgtgtgcaaaaatggcacgaaaatccagttatccacctta
ctacaaaggcaccaattacaaacagggacaaccacagccatactgacagttgcccaaatc
attgctgccgctaaagacgttaatagtattgatgatatccttgaatgttctctctatgca
agagctactgtcttcactagctcaggcagtgacattgtaacagcagaactcacaggcatc
aaagtggttacatctccttactcaattcattttaccaaatcctccaaattcttcaagcca
ggcctaccatttaatcttcatgtgtacctgactgacacttctggctctcctgtaaagggc
attgaaatagagagagagggacagaaatacttcacagacagccacggaatagctgtcatc
accattaacactgttcgcacagacaaaaaaaaaaatgtccaagtgacaacagctgtctct
gatttacttgattctagtcaccaggcacgaaaagatatcacacttttagcatacgagaca
aagacagtcaaagagtacatccacctttctgtggacaaatctgttgtgaagaaggatgag
tccctctacgttgccattaacttccttggagaaaatggggcccaggtttttcaacatgat
ttcatttcatacatggtggtcagcaaagggcggatcattgaaatggggaagtggaattca
aaggacaaagctctcctcaaagaaaccttgaaagtaactccagacatgctcccttccttc
cgcctggtggctttctacattgtgccatcgcaaggttatgacgtggtggctgactcactg
tgggtggacgtggaggaccagtgcatgggacagctaaaactatccataaagaaatctaat
aaacgtctagacttccgcccaagagaagagttctctctgaacgtggagggagacccaggt
gccaaggttgggctggtggtggttgacaaggctgcttacatgctgagtaaaaagggcaat
ctcacgcaggccaagatctgggatgaagtagagaggagtgacaaagggtgcacaagggga
ggggggcgaaacaacatggccattttctcagatgctggcctcctgtttgaatccaatcaa
gaaaaaacagcacctagacaacgattcagttgtgacacagaggtacctaaaaggaggcga
gaggcaaagtctttacaggatgccaaaaatgagctagcgatacagtgtgaaaaggatgtg
aataggtgctgtcatgatggcatgatggactttcccttggactactcatgtgagaagcgc
tcgcactacatcacagaagggccgaagtgtgtggaggcctttctacgctgctgtcaagga
atccagaaagataagatacgcttcaccaccccagaactgatcctcgctcgcaaagcaaat
gaagatttctttgatgaggatgaggaggacattattatccgctctaaatttgatgtcagc
tggatgtggaccaccatactgctgagtgataaagaaacggatgctggtattgtcacacat
gaaaagactaacatggttcttcaagactccatcacacagtggatggtcctcggtatcagt
acctctgaaacaaaaggtgtatgtgtagcagaacctgtagaaatgactgttgtgaagaac
ttctatgtggacctgcgcctaccatactctgttgtaaacagagagcaagtgcagatcaaa
gtagttatacacaactatgatgaagattctcaaaaggtcacagttttgttaaaggccagt
gagggtctgtgcactgcaacgaattacagaggatcctacaaggaaatagttaatgtggac
aaaaagtcacagaaagtcctgtatttcactgtcattcccatgaaaccaggcaaacaccaa
atcactgtaacggcccggagcgagtattatagagatggcatagagaaacaacttcttgtt
gtgccagaaggagtggagaagaccgaactaaagaaaaggatattgcaaccagattttatg
aatgggaagcagacaggagaagtttacattaacctgaagaacatgcttccagacacagtg
tcaagtacttacatcgctatagaaggggactccctggcagatacagtaatcaactccatt
ggtggtgcagtactgagtaaactcattaagatgccaggtggctgtgtagagcagaacctg
gtttcaatgactgcccccatcatcgccacacactacctggatcacgccaatgcctgggag
gaggtgggagtggagaggagagctgaggcccttaaatatgtagatcaaggctatcaaaga
caccttggttacagaaactctgatgacacgtattctccatatggaaagggtggaatccca
agcacatgggtgacagcttacactgccaaggtgtttgcaatggtgtatatgtttggggtc
gtggaggatattagagtgtgcaaacctttgaagttccttgtaaaacaacagaactctgca
ggaacttttcaagaagatgctccaatcaaacattgggagatcacaggtgggctatataag
gaaggagatgtggcaacaactgcttttgttctgatagccatgcaagagaccctcgggatc
tgtaaggatatagacacggacctcgatggagccatgaagaaagcctcagattacatattt
aatgcacttcctgctcaatccagtccctactctgtagccatatcttcctatgccctggca
ctgactaaaaaatctgaatggaaagataaactcttaaaagaattagatcgaacaagcaca
gagggcactcattggggtggaaatgatgataaaggggtggaggcaacagggtatgcactt
tcagccctcgtgacactgggtgagcttaagagatcagaggctgtgagtgactggctggtg
gccaagagtcgagcaaatggacaatttgggaacacacagtgcaccatagtggtgttccag
gccctttctctgttccaaaaacagaagcctgccccaccaggtaatgacataagtgtaagc
ctgtctgtcaacagccctgtccgcacgggccaaagcagctctatcaaatggaatttagac
cagagatccaggtttatgtcacgatctgaaaggataccacagctgacggatttcactttt
gaagcaaaggggtcagggaaagcaaaattaaaggtcctgacaacatactacgccatgctt
gtgaaagagcagtcagtttgcaaaggatttaacatgagccattcaatagaaaagattaat
gaagcaaaggctccagagggtgttgtcggtgtctacaaactgaccatatgtgttaggcct
cttgaagggacctccaacaagatggccattctggatgtatctcttccttcaggttttgtg
cctgactatacaagtcttaatgagttgttgtctcgcaaggacaagttgattcacttctac
caactggacaaggagctttctgataaaggatctctcattattcacatatacgatctatct
cctagtcctaactctgattactgcgtaccagtgactctgtatcaagaatttactgtgcgc
ctcctacagccttcttcaattaaggtgtattcctattaccaatcagaaaagagctgcacc
agattctacagcccctttaagaatagcacagacgaggacattatctgcagcaagaatggt
tgcgcgtgcattgacaaaaattgtccatccgtgaagaaggctgagtccttaacagcttct
gaccgtgaagaggaagcctgcgtttggactaaccctgtttacaacattaaagtaaaacat
attcaagaggatgagaacaccctgatcaaatataaaatggagattcaaaaggcctataaa
cttgggaatgatttaaaagtggatgttaaaacggagagagatttctatgcccaccgcatg
tgccagacgtctcttggtttgaagaaggataaattgtatttattcataggcaatccaaaa
gacataatactgggtgatgatggcagttattcttatgtcctgtcgggaaacacgtggctg
gaagaatttgaatctgggggagaacaggcgacattcctgaataagcttgagacttctggc
tgcagcacttga
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