KEGG   Salvelinus namaycush (lake trout): 120057056
Entry
120057056         CDS       T07522                                 
Name
(RefSeq) polyubiquitin-C isoform X1
  KO
K08770  ubiquitin C
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03320  PPAR signaling pathway
snh04120  Ubiquitin mediated proteolysis
snh04137  Mitophagy - animal
snh04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    120057056
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    120057056
   04137 Mitophagy - animal
    120057056
 09150 Organismal Systems
  09152 Endocrine system
   03320 PPAR signaling pathway
    120057056
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:snh04121]
    120057056
Ubiquitin system [BR:snh04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   120057056
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 DUF2604 Rad60-SLD_2 TBK1_ULD Ubiquitin_5
Other DBs
NCBI-GeneID: 120057056
NCBI-ProteinID: XP_038861364
UniProt: A0A8U1C478
LinkDB
Position
Sna12:complement(27098232..27100731)
AA seq 533 aa
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagaccctcacaggcaagaccatcacccttgaggtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgccggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagagtccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgccggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgccggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccaccctccat
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgccggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaagagtccaccctccatcttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaa
gtggagcccagtgacaccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatcttcgccggcaagcagctggaagatggccgcaccctc
tcagactacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggc
atgcagatcttcgtcaagaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaacgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgccggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagagtccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgccggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccatcttgtgctgcgtctcaggggaggacagtaa

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