Salvelinus namaycush (lake trout): 120057056
Help
Entry
120057056 CDS
T07522
Name
(RefSeq) polyubiquitin-C isoform X1
KO
K08770
ubiquitin C
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03320
PPAR signaling pathway
snh04120
Ubiquitin mediated proteolysis
snh04137
Mitophagy - animal
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120057056
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120057056
04137 Mitophagy - animal
120057056
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120057056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120057056
Ubiquitin system [BR:
snh04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
120057056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
120057056
NCBI-ProteinID:
XP_038861364
UniProt:
A0A8U1C478
LinkDB
All DBs
Position
Sna12:complement(27098232..27100731)
Genome browser
AA seq
533 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagaccctcacaggcaagaccatcacccttgaggtggagcccagt
gacaccattgagaatgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgccggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagagtccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgccggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctc
actggtaaaaccatcacactagaagtggagcccagtgacaccattgagaatgtgaaggcc
aagatccaggacaaggagggcatccccccagaccagcagcgtctgatcttcgccggcaag
cagctggaagatggccgcaccctctccgactacaacatccagaaagagtccaccctccat
cttgtgctgcgtctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaacc
atcacactagaagtggagcccagtgacaccattgagaatgtgaaggccaagatccaggac
aaggagggcatccccccagaccagcagcgtctgatcttcgccggcaagcagctggaagat
ggccgcaccctctccgactacaacatccagaaagagtccaccctccatcttgtgctgcgt
ctcaggggaggcatgcagatcttcgtcaagaccctcactggtaaaaccatcacactagaa
gtggagcccagtgacaccattgagaatgtgaaggccaagatccaggacaaggagggcatc
cccccagaccagcagaggctgatcttcgccggcaagcagctggaagatggccgcaccctc
tcagactacaacatccagaaagaatccaccctccatcttgtgctgcgtctcaggggaggc
atgcagatcttcgtcaagaccctgacaggcaagaccatcaccctcgaggttgagccaagc
gacaccattgagaacgtgaaggccaagatccaggacaaggagggcatccccccagaccag
cagcgtctgatcttcgccggcaagcagctggaagatggccgcaccctctccgactacaac
atccagaaagagtccaccctccatcttgtgctgcgtctcaggggaggcatgcagatcttc
gtcaagaccctcactggtaaaaccatcacactagaagtggagcccagtgacaccattgag
aatgtgaaggccaagatccaggacaaggagggcatccccccagaccagcagcgtctgatc
ttcgccggcaagcagctggaagatggccgcaccctctccgactacaacatccagaaagag
tccaccctccatcttgtgctgcgtctcaggggaggacagtaa
DBGET
integrated database retrieval system