Salvelinus namaycush (lake trout): 120059346
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Entry
120059346 CDS
T07522
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X1
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120059346 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120059346 (usp19)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120059346 (usp19)
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120059346 (usp19)
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120059346 (usp19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
120059346
NCBI-ProteinID:
XP_038864264
UniProt:
A0A8U1EMH4
LinkDB
All DBs
Position
Sna14:complement(27538081..27582183)
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AA seq
1486 aa
AA seq
DB search
MASSTESGRRNGGQRSTDASTSKKKQKDRANQESREAKRAAAAAGDNAEHKKDVFVDWKQ
NANEVTVRLRCGEGVQSVEDVTTTFTDTDCQACFPDGRQWDCHLHEEIEGSCSKVQYKEK
CGFLLLVMHKKIPFHSWPSLKQTKKEKEPVNVQAKNGKEQKPPPVVKPEKSVPETADKPK
LSTQPPAPPAQSEQRRGKVERGVKRTMKNKPAADRPESGVRAAEEGQTKPLSKGDLPQEP
SAKRTVRPPKASKDPTSQTPRDTHPKSTANGKPHTPTPTDRDPQTYTAGDNRAERLGNGH
ECTPHEIAVSHTKQEMKVQLEKAPESDFKARAGEERIPSATVSSAVSSHKAEDSTNRTER
QGEAERTESSTVVRKSKDEADQATLTPTQQSGSGEPVTATPSKQAEFTSSTEEEKKDQSK
EEPLEIKQLEEAVPEPMVNLNFVKNDSYEKGTDLMVVNVYMKSICRETARVIFREQDFTL
LFQTSDAIFLRLHADCGVNTVFKWQVKLRNLIQPEQSTYSFTPSRIDITLKKRHSQRWGG
LEAPATQGAVGGAKVAVPSGPSSQTSQPGSSQHSLPAKEEPPRAEDGGLDNVSARTVSDH
APIKQEPAVTPKPTCMVQPMTHAPPAGSERSVEEEEEKVCVPGFTGLVNLGNTCFMNSVI
QSLSNTRELRDYFHDRAFETEINCNNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKA
IVASKASQFTGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRLDEVVAEEAWQ
RHKMRNDSFIVDLFQGQYKSKLVCPMCSKVSITFDPFLYLPVPLPQKQKVLTVFYFAKEP
HKKPIKFLVSVSKENSSTAEVLESISRSVRIKAENLRLAEVVKSRFHRIFLPSHSLDTVS
SSDMLFCFEVLSKELAKERVVVLRVQQRPQVPSIPISKCAACLKPPLSEEEKLKRCTRCY
RVGYCNQACQKNHWSNHKSLCHPNMENVGLPFLVSVPESRLTYARLSQLLEGYSRYSVNV
FQPPFQSGRTSPEGTQCRADLPPPAETPDGVRPGDEARGGGAGDSDQESPFLVPESPLET
AQASAHPAGDPDALSTRTTDSGFSEPSSCSQDPQGEKETSYEKAVRPEAAVTGYQQPSES
ASSHASQFYISILDSNSREQKLEEKEEAVLDLPDESTLALVWKNNERLKEYVLVRSKELD
FKEDPGSVSETARAGHFTLEQCLNLFTRPEVLAPEEAWYCPKCQQHREASKQLLLWRLPN
VLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSKFCIGQKDDMQQPPIYDLYAVINHYG
GMIGGHYTAYARLPSAQNSQRSDVGWRLFDDSTVTTVEENQVVTRYAYVLFYRRRNSPVE
RPPRFLGPLGVESPTAAGATASQASLIWQELEEEEEGLEEGPRGLFRTSLGRRAARRREE
GVEGQVRRRRQRISDYSDDDCVRYLVLGTLAALLALFLDLIYPLLY
NT seq
4461 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcactgaatcaggccggcggaatgggggtcagcgcagcaccgatgccagc
accagcaagaagaagcagaaggacagggccaaccaagagagcagggaggcaaagcgagca
gcagcagcagcaggggacaatgcagagcacaagaaagatgtgtttgtggactggaagcag
aatgcgaatgaggtgacagtgaggctgcgctgtggagagggggttcagagtgtggaggac
gtcaccactaccttcactgacacagactgtcaggcctgcttcccagatgggcgccagtgg
gactgtcacctgcatgaggagattgagggctcctgcagcaaagtgcagtacaaagagaag
tgcggattcctgcttttggtcatgcacaagaagatcccctttcactcctggccctccctt
aagcaaactaaaaaggagaaggagcctgtgaatgtgcaggccaagaacggcaaagagcag
aaaccgccgcctgtggtaaagcctgagaaatctgtcccagagacggcagacaagcccaaa
ctgtccacccagccgcctgctccgcctgcacagagtgaacagagacgtggcaaagttgag
cgaggtgtcaaacgcaccatgaagaacaaaccagcagcagacagaccagaatctggggtg
agggctgcagaagaggggcagaccaaacctctcagtaaaggggacctgcctcaggagcct
agtgccaagcgcactgtccgtccccccaaggcctccaaggaccctacttcacagacaccc
agggatacacaccccaagtccacagccaatgggaaaccgcacacccctactcccactgac
cgggacccccagacgtatacagctggtgacaatcgtgctgagaggctaggcaacggtcat
gagtgtacaccacacgagatagccgtcagccacacaaagcaggagatgaaagttcagctg
gagaaggccccagagtctgatttcaaggctcgggcgggagaggaacgcataccgtcagcc
actgtgtccagtgctgtgagcagccacaaggctgaagactccacaaacagaacagagcgg
caaggggaggctgagcggaccgagtcctctacggtagtgagaaagtcgaaggatgaggct
gaccaggccactctaacaccaacccagcagtcaggatcaggggagcctgtgactgcaaca
ccaagcaagcaggctgagttcaccagcagtacagaggaggagaagaaggaccagtctaaa
gaggaacctctggagattaagcagctggaggaagcagttccagagccaatggtgaacctc
aattttgtgaagaacgactcatacgagaaaggcacagacctaatggtggtcaacgtttac
atgaagagcatctgcagagagacggccagggtgatcttcagggaacaggacttcaccctc
ctcttccagaccagcgatgcaattttcttgcgccttcatgcggactgtggagtgaataca
gtttttaagtggcaagtcaaactcaggaacctcatccagcctgagcagtctacgtactcc
ttcaccccgtcccgtatagacatcactctgaagaagagacacagccagcgctgggggggc
ctagaagcccccgctacacaaggtgcagtggggggcgccaaggttgctgtgccctccggg
ccgtcatctcagactagtcagccgggcagcagccagcacagcctccctgccaaggaggag
ccaccccgggcagaagacggaggcctggacaatgtgtccgcccgcaccgtctcagaccat
gcccctatcaaacaggagcctgcagtcacgcccaaacccacctgtatggtccagcccatg
acccacgcgcctcctgctggcagcgagcgcagtgttgaggaggaggaggagaaggtgtgt
gtgccaggcttcacaggcctggtcaacctgggcaacacatgcttcatgaacagcgtcatc
cagtctctgtccaacacccgagaactcagggactactttcatgaccgggcgtttgaaact
gagatcaactgtaataacccattggggacgggtggtcggctggccatcgggttcgctgtg
ttgctgcgggctctgtggaagggtacccaccatgctttccagccctccaagttaaaggcg
atcgtggccagtaaggccagccagttcacaggctatgcccagcacgatgcccaagagttc
atggccttcctcctggatggtctccatgaggacctgaaccgcatccagaacaagccctac
acagagacggtggactcagacggacggctggacgaggtggtggcggaggaggcgtggcag
aggcacaagatgaggaacgactcgttcatcgtggacctcttccaaggccagtacaagtcc
aagcttgtctgccctatgtgctccaaggtttccataacctttgaccccttcctctacctg
cccgtgcccttgccccagaagcagaaggtcctcaccgtgttctactttgctaaagagcct
cacaagaaacccatcaagtttctggtgagtgtgagtaaagagaactcgagcacagccgag
gtcctggagtcaatctctcggagtgtgaggatcaaggcagagaacctgagactggcagag
gtggtgaagagtcgcttccataggattttcctcccctcccactccctggacacggtctcc
tcctcagacatgctcttctgcttcgaggtgctgtctaaagagctggccaaggagagggtg
gtggtgctcagagtccagcagaggcctcaggtccccagtatccccatctcgaagtgtgct
gcctgcctgaagcctcccctctcagaggaggagaagctgaagcgctgcacccgctgctac
cgcgtgggctactgcaatcaggcttgccagaaaaatcactggtccaaccacaagagtctg
tgtcaccccaacatggagaacgtggggcttcctttcctggtcagcgtccctgagtccaga
ctcacctacgcccgtctgtcccagctgctggaaggatactcaaggtattcagtgaacgtg
ttccagcctcccttccagtctggcagaacgtccccagagggcacccagtgccgggctgac
ctcccccctccagcagagacccctgatggtgtgaggccaggggatgaggctaggggcggt
ggggcgggagactctgatcaggagagcccctttctggtccctgagtctccattagaaaca
gctcaggcttcagcacacccagccggagatccagacgccctctccacccgcaccacagac
tctggcttctctgagccctcctcctgctcccaggacccccagggagagaaggagacctca
tatgagaaggctgtcaggccagaagctgcagtgacaggctaccagcaaccatcagaatct
gcgtccagccacgcttctcagttctacatctccatcctcgactccaacagcagggagcag
aaactggaggaaaaggaagaggctgttctggacctccctgacgaatccaccctggcacta
gtgtggaagaacaacgagcgtctcaaggagtatgtgctggtccggtccaaggagctggac
tttaaggaggaccctgggtcggtcagtgagacggccagggctggacacttcaccctggag
cagtgccttaacctcttcactaggcctgaggtgctggcaccagaggaggcatggtactgt
ccaaagtgccagcagcacagggaagcctccaagcagctgctgctgtggcgtctgcccaac
gtcctcatcatccagctcaagcgcttctccttccgcagcttcatttggagggacaagatc
aacgacatggtcgatttccctgtcaggaacctggacctcagtaagttctgtattggtcag
aaggatgacatgcagcagccgccaatctatgacctctatgctgtcattaatcactatgga
ggcatgatcggaggtcactacacagcctacgcacgcctgcccagtgcccagaacagccag
cgcagtgatgttggctggcgtctgtttgatgacagcacagtgacgacagttgaggagaac
caggtggtgacacgctacgcctacgtgctgttctaccgccgccgcaactcccccgtggaa
cgaccacctcgcttcctagggcccctcggggtcgagtcccccaccgctgcaggagccacc
gccagccaggcctctctaatatggcaggaactggaggaggaagaggagggtcttgaagag
ggcccccggggcctgttccgcaccagcctggggagaagagcagccaggaggagggaggag
ggggtggaggggcaggtgcgacggcggcgccaaaggatctcagattattccgatgacgac
tgcgtgcgatatttggtcctgggcaccttggctgctctgctagcgttgttcctggacctg
atctaccccctgctctactga
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integrated database retrieval system
