Salvelinus namaycush (lake trout): 120059549
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Entry
120059549 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-5-like
KO
K06240
laminin, alpha 3/5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04382
Cornified envelope formation
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120059549
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120059549
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120059549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
EGF_laminin
Copine
Laminin_G_1
Laminin_I
Laminin_B
C2
Laminin_II
EGF_LMN_ATRN
Laminin_G_3
vWA-TerF-like
TS_C
Pescadillo_N
Tropomyosin
FKBP15
Motif
Other DBs
NCBI-GeneID:
120059549
NCBI-ProteinID:
XP_038864610
UniProt:
A0A8U1BVX3
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All DBs
Position
Sna14:complement(2965212..3281889)
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AA seq
2830 aa
AA seq
DB search
MDKLDSMAAVCDFDPIAGSVPATKVEITVSCRNLLDRDTFSKSDPLVVLYTQGVETKQWR
EFGRTEVIDNTLNPDFVRKYILDYFFEEKQNLRFDVYDIDSKSPDLAKHDFLGQVFCTLG
EIVGSPASRLEKPLGGIPGKKCGTIILSVEELGNCREVATMQFCAHKLDRKDFFGKSDPF
LVFYRSNEDGTFTICHKTEVVKNTLNPVWQAIAIPVRALCNGDFDRTIKAEVYDWDRDGS
HDFIGEFTTSYRDLSRGQSQFNVYEVVNAKKKIKKKRYINSGTVTMLSFAVESEHTFLDY
IKGGTQIHFTVAIDFTASNGNPSQSTSLHYMNPYQMNAYAMALKAVGEIIQDYDSDKMFP
ALGFGAKLPPDGHVSHEFPLNGNIENPYCNRMEGILEAYHQSLKTVQLYGPTNFSPVVNH
VAKYAAAVQDGSQYFVLLIITDGVISDMAQTKEAIVNAAKLPMSIIIVGVGHAEFDAMVE
LDGDDIRISSRGKLAERDIVQDYVLVVPESSYSSSYLSEQPLDKSYDFISNCGQNSFYIN
PATASPFCRSSAISLSAFFNNGAMHCGCHEVGADSDTCEPFGGQCQCRPNVIGRDCSQCA
TGYWGFPNCRACVMWYTLCGPVTGDCICPPRTLXSKCIQCEPQTFSCHPLVGCEVCNCSH
PGVTALDVSCDTDSGQCRCKNNIIGRRCNRCTHGFYGYPNCRPCDCNDAGTEEEVCDSYT
GRCLCKENVQGGRCDQCRVETFHLDPTNPKGCTSCFCFGATNRCRSSEKRRTEVMDMMVW
VLLGADRQEVPVTVYPGQDVVEADLDDVPDVYQDLLWHAPRTYLGDKVSSYGGYLRYHLH
TQTMRGDVVSLPAEASRPDVILKGNQMTLVFMEIEYSSPEEPHLGIVHMVEGSFRHARTG
NVVSREELMMVLVGLESLQIRALHSQSAHTVSLRGVVLEGAQTLPTGRHANNVEICLCPA
NYRGDSCQQCAPGYYRDTKGLFLGKCVPCNCNGHSDQCLDGSGVCENCQHNRAGDHCEKC
QGGFHGNNSLDGQTLSCDTCPCPLQVFSNNFAVGCVEKLNRMQCLCIPGYAGPQCQRCAP
GFYGNPMVIGSACQPCHCHGNTDPNMLFSDCDGLTGECHSCMHNTAGTHCEICGPGFHGD
AVTAKNCTRCNCSPCGTASCDRHTGQCQCKQGVTGPHCDRCQDGAFGYDSCSGCRRCDCD
AAAAAQVQPCDPRSGSCACQPGISGPNCRQCAPGYWDYSPEGCRKCQCKHGRCDPRTGEC
HCGEGLTGKQCDSCSHRYSVPVQHGHDMTCEPCDSCVVVLLKDLDGMNDNFGSVAHQLIN
MGVSSIPWARLNNLSRSVNDIANALENYSNTLDESSNRVDMLEGEFININSDINDLEGKV
GATADKANTLEDSGTNTHQRAQDLLSHIKSIMGDVKDLMLQAKRTGLKETKVEQEEEDLS
EKIQQVEAMLREMRFKSCVGQKKIADRELSEAEKLLEKVKDQLVSRVVENEGLDKNIRER
LEKFHDQLMDLRDALNQAVYNTAVASDSNAVNEKRLEDCQQQVDELNMKNKEVWDLLQVT
EEDVTTVTDMLSMLHDSKEDYERLAAQLDGSRKPLAEKVQRFSPSVSKIPLVEAAEKHAE
LLNELARNLSSVISNINRDGFIQRTVNASRAYSDIVDAVRAAEIAANQAAVDALANVQDQ
DLGQTANGLKKYSIELVNQAVKLQEDVSNDLKPQLQDAKTRLDEARDKQETLLNDLEMVQ
SSLNVSREETASDIEEAKAAAEEASSTAARVKDTLAPIKEQLDQWQQQYGDANTNNNDVH
KAFLEANTSVGMLGEAIPILMKKLDKLQNHSAQMPNISENILRIRQLIAEARKAASKVSV
PVKFNGTSGVQVRIPSNLADLAAYTSLKFYITLPEASRARRQDQPDKQFVFYLGNRDTSK
EFLGMMLEGQRLHWLFNVGGETTEVEMPEDVQTDGNFNNVVLERILQYGQMAMTSETRIT
KAVVEAGGDSGLLNLQTEETVFYVGGYPDTFTPPLQLQLPNFKGCIELETLNEEVLSLYN
FENIFQLNTTKEKPCGRTMPVLTQQWVNDAAYFDGTGYAEVTLKEETGKMQRFEQEVKLM
SHNGILLMLLSQEKFLSLVVRQGRLRVFYDVTGSLQELEPKDPESPYLKISDAEPKSLEI
ILLYDTATRVVVRNNRQTLLNYVFTTPLPRFEASYYLAGVPEDKMPENLKGLFPRQGSLK
GCFRNVKAMNSHIDLKRMASSGVSYGCANDLLVAREAHFSGQSYLDLSPDSIPGLRNNFY
AGFGFRSDQKNGLMFYHQAQDGVCQVFLDKGHVVVRAGNNEVKTQKTYNDDNDHYVTLYS
NNNRLRVYVDDVLEKNGDTGGGGGSSRVALSPGGVYLGGTPDNSLNNLTGCLSNLFIKRD
KPSQMVMNLMNVNENINVPLECPAANKPQQILATPPRQKHVKGKHRKPAGGAGSRGRSRS
ARESCQGDLTNQEVGALHFSGSSHSHQRYDRLPEAFSRTPHISMGLRVNSSEGLVFCVSG
SGERSSSVMTLSVSDGRLLLLVDGGKRKTSIRSRRKYNDGQWHTVFVKREGEKASLIVDG
INAQSKRVSGGEKPPLSSPLYIGGVPSAVASSLLTVPGPGGFVGCVRDLELNEESPANPS
TSLGVVPCFQTNLQPGAYFSSQGGHMAIDEGLVLGRDLEVQLEVRLVSDSGLLLHAGSRQ
QLSLYLNQGKVTVTVNSGHGEFSTSFTPEESLCDGHWHSITVMKRNNVLQLHVDADSEHS
VGPKQGRSSGAKETVYLGGVPDGVDVPGLPAALPSFHGCVRRAVLNQRPAVLSKPLLVYG
AVGTQGCPAM
NT seq
8493 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctagatagcatggctgcggtgtgtgacttcgatcccattgcgggaagcgtc
ccggccaccaaagtggagatcaccgtgtcatgcaggaatctattagacagagacacattc
tccaaatctgatccattggtggtgttgtacactcagggcgtcgagaccaaacagtggaga
gagtttgggagaacggaggtgattgacaacactctaaacccagactttgtcaggaagtac
atcctggactacttctttgaggagaagcagaatctacgctttgacgtatatgatatcgat
tccaaaagtccagatctggcaaagcatgacttcttggggcaggtgttctgtactctggga
gagatcgtaggatcccccgccagtcgactggagaaaccccttggtggtatccctgggaag
aaatgtggtaccattatcctttcagtcgaggagctgggaaactgcagagaagttgccacc
atgcagttctgtgcccacaagctggacaggaaagacttctttgggaagtcggaccccttc
ctggtcttctatcggagtaacgaggatggaacgtttactatctgccacaagacggaggtt
gtgaagaacactctaaacccagtgtggcaggccatcgccattcctgtcagagcactgtgc
aacggagacttcgataggacgatcaaggcagaggtgtacgactgggacagagatggcagc
catgacttcatcggtgaattcaccaccagctaccgagacctgtcccgaggccagagccag
tttaatgtgtacgaggtggtgaatgccaagaagaagatcaagaagaagagatacatcaat
tctgggacggtgaccatgctgtcgttcgcggtggagtcagaacacacattcctcgactac
attaaaggaggaactcagattcacttcacggtggccattgatttcacagcatccaatggt
aacccgtcccagtccacctccctccactacatgaacccgtaccagatgaatgcgtatgca
atggctctgaaggctgtaggggagatcattcaggactatgacagtgacaagatgttccct
gctctgggcttcggagcaaagctgccccccgatggacatgtgtcccacgagttccccttg
aatggcaacatagagaacccctactgcaacagaatggagggaattctagaagcataccat
cagagtctgaagactgtacagctctacggacccaccaacttttctccggttgtcaaccat
gtggcaaagtacgcagcggccgtacaggacggctctcagtactttgtcctgctcatcatc
acagacggagtcatatcagacatggcccagaccaaggaggccatcgtcaatgctgctaag
cttcctatgtctatcatcattgttggagttggacatgctgagtttgatgccatggtggag
ttggacggtgacgacatcagaatctcctcgcgagggaagctagcagaaagagacattgta
caggactatgttctggtggtgccagagagcagctacagttccagttacctgtctgaacag
cctctggacaaatcatatgacttcatcagcaactgtggacagaacagcttctacatcaat
cctgccacagcctctccattctgtcgtagttcagccatctctctctctgcgttcttcaac
aacggtgccatgcactgcgggtgccatgaggtgggcgcggacagcgatacctgcgaaccc
ttcggtgggcagtgccagtgcagacccaacgtcatcggcagggactgctcacagtgtgcc
acgggctactgggggttccccaactgtagagcgtgtgtcatgtggtacacgctgtgtggg
ccggtgactggagactgtatctgcccaccgaggaccctgnnctccaagtgtatccagtgt
gagccccagacgttcagctgtcatcctctggtcggctgtgaggtctgcaactgctcccat
cctggagtcaccgccctcgacgtcagctgtgacaccgacagtggacagtgcagatgcaag
aacaacatcattggtcgtcggtgtaatcgctgcacccatggtttctatggttaccccaac
tgtaggccatgtgactgcaacgacgcggggacagaggaggaagtgtgtgactcttacacg
ggacgatgcctctgcaaggagaatgtccagggtggtcgttgtgaccagtgcagagtggag
accttccaccttgaccccaccaaccctaaaggttgcacttcctgtttctgtttcggagcc
accaaccgctgccgtagctctgagaaacgacggactgaggtgatggacatgatggtctgg
gtgctgctgggagcagacagacaggaagttcctgtgacagtatatcctggacaggatgtg
gtggaggcggaccttgatgatgtacctgatgtctaccaagacctcctgtggcacgctcct
agaacatacctgggagacaaggtgtcgtcttatggaggctatctgcggtatcatctacac
actcagactatgagaggagatgttgtctctctgcccgctgaagcctctcgacctgacgtc
attctcaagggtaaccagatgaccctggtgtttatggagatagaatattcttcacctgaa
gaaccacacctggggatagtccacatggtggagggaagtttccgccacgcccggacgggg
aacgtggtgtctagagaggaactgatgatggttctggttggtttagagtctctccagatc
agagctctccactcccagtctgcccacactgtgtcgctacgcggggtcgtgctggaggga
gcacagacactgcccacgggacgacacgccaacaacgtagagatctgtctctgtcccgct
aactaccggggagactcctgccagcaatgtgctccagggtactacagagacactaaaggg
ctgttcctggggaagtgtgttccctgcaactgtaatggccactctgaccagtgtctagac
gggtctggagtctgtgagaactgtcaacacaacagggctggagaccactgtgagaaatgt
caaggtggtttccatggtaacaactctttagatggacaaaccctctcctgtgacacctgc
ccctgtcctctgcaggtgttttccaacaattttgcagtgggctgtgtggagaaactcaac
aggatgcagtgtctgtgtatccctggctacgctgggccccagtgtcaaaggtgtgctccc
ggtttctacggcaaccccatggttattggcagcgcgtgccagccctgccattgccatggc
aacacggaccccaacatgctgttcagcgactgtgacgggctgacgggcgagtgtcacagc
tgcatgcacaacaccgccgggacgcactgcgagatctgtggccctggtttccacggtgac
gccgtcactgccaagaactgcaccagatgcaactgctctccctgtggcacagcttcgtgt
gaccgtcacacaggacaatgtcaatgtaaacaaggtgtgaccggaccacactgtgaccgc
tgccaggacggtgcgtttggctatgattcgtgctccgggtgtcgtcggtgtgactgtgac
gcggcggcggcggcccaggtccaaccgtgtgaccccaggagcgggtcgtgtgcctgccaa
ccagggatcagtggacctaactgtcgccagtgtgcccctgggtactgggactacagcccc
gagggatgcaggaagtgtcagtgtaagcacggccgctgtgaccctcgaacaggggagtgt
cactgtggagaaggcctaacaggcaaacagtgtgacagctgttcccatagatacagtgtt
cctgtacaacacggacatgatatgacctgtgaaccatgtgacagctgtgttgtagtcctg
ttgaaggatctggacggtatgaatgacaactttggctcagtggctcatcagctgatcaac
atgggcgtctcctctatcccctgggctcggctaaacaacctcagcagatccgtgaacgat
atcgctaatgccttagagaactacagcaatactctggatgagagcagtaatagagtggac
atgttggagggagagttcatcaacatcaattcagacatcaatgacctggaggggaaggtg
ggggcgacagcagacaaagcaaacactctggaggacagcggcactaacacccatcagaga
gcccaggacctgctctcacacatcaagagcatcatgggagatgtgaaagacctcatgctg
caggcaaaacgtacgggtctgaaggagactaaagtggagcaggaggaggaagacctctct
gagaagatacagcaggtggaggccatgctgagagagatgagattcaagagctgtgtcggc
cagaagaagatagccgacagagagctgtccgaggctgagaaactgctggagaaggtgaaa
gaccagctggtgagtcgtgtggtggagaacgagggcttggacaagaacatcagggagcgt
ctggagaagttccatgaccagctgatggacctgagggacgctctgaaccaggcagtttac
aacacggccgtcgcctccgattctaacgctgttaatgagaagaggctggaggactgccag
caacaagtggatgagctgaatatgaagaacaaggaggtgtgggatctcctgcaggtgaca
gaggaggacgtgaccactgtcaccgacatgctgtctatgctgcacgactccaaggaggac
tatgagcgtctggcagcccagttggatggttccaggaagcccttggcagagaaggtgcag
aggttttccccctccgtcagtaagatacccctagtggaggcagcagagaaacatgctgag
ctactcaatgagctggccaggaacctctccagtgtgatctccaacatcaacagggatgga
ttcatccagcgaacggtgaacgcgtcccgggcgtactccgacatcgtcgacgccgtcaga
gccgctgagatcgctgccaaccaggctgctgtggacgcactggcgaatgtacaggatcag
gacctgggccagacagctaacggtctgaagaaatacagtattgaactggtgaaccaggct
gtcaaactacaggaagatgtcagtaatgacttgaagccccagctccaggatgctaagact
cgtctggatgaggccagggacaaacaggagactctactgaacgacctagagatggtgcag
agtagcctcaacgtcagtagagaggagacagctagtgacattgaggaggctaaagcagca
gcggaggaggccagcagtacagcagcgagggtaaaggacaccctggcccctatcaaggag
cagctggaccaatggcagcagcagtacggagacgccaacaccaacaacaatgacgtccac
aaggccttcctggaggccaacacctctgtgggtatgttgggcgaggccatcccaatactg
atgaagaagctggacaagctgcagaaccactcagcccagatgcccaacatctcagagaac
atcctcaggatcagacagctcatcgctgaggctcgcaaggcagccagcaaggtgagcgta
cctgtcaagttcaacgggacatcaggtgtgcaggtgcgtatccccagtaacctggcagac
ctggcagcttacacctccctgaagttctacatcaccctgcccgaggcctcacgcgcccgc
agacaggaccaaccagacaaacagtttgtcttttacctcggaaacagggacaccagtaag
gagttcctgggaatgatgctggaagggcagagactgcactggctcttcaatgtgggcgga
gagacgaccgaggtggagatgccggaggatgtccaaacagatggcaacttcaacaacgtg
gtcctggaaaggatccttcagtacggtcagatggccatgacgtcggagaccaggataacc
aaggctgtggtggaggcaggaggggacagcggactgctcaacctccagactgaagagact
gtgttctatgtgggaggataccctgacacgttcacgccccctctccagctccagttgccc
aacttcaagggctgtattgagctggagaccctgaatgaggaggtgctcagtctctataac
tttgagaacatcttccaactcaacaccaccaaggagaaaccatgtggaagaactatgccg
gtgttgacccagcagtgggtgaacgacgcggcctactttgacgggacgggttatgctgag
gtcaccttgaaggaggaaacggggaagatgcagcgctttgaacaggaagttaaactgatg
agtcacaacggcatcttgctcatgctcctcagccaggagaagttcctgagcttggtggtg
cgtcagggacgtctcagggtcttctatgacgtcactggttctctacaggagctggagcct
aaagacccagaatccccttacctcaagatcagcgacgctgaacccaaatctttggagatc
atcctcctctacgatacggccacgcgtgttgtggtgaggaacaaccgccaaaccctgctc
aactacgtcttcaccacgcccctgccgcgcttcgaagccagctactacctggctggtgta
ccagaggacaagatgcctgaaaacctgaagggcctgttccctcgccagggctctctgaag
ggctgttttaggaacgtcaaggccatgaattctcacatcgacctgaagaggatggccagc
tctggggtcagctacggctgtgccaacgacctactggtggcccgtgaggcccacttctca
ggccagagttacctggacttgtctccagacagcatccctggtctcaggaacaacttctac
gctgggtttggcttccgctcagaccagaagaacggactcatgttctaccaccaagctcag
gatggagtgtgtcaggtgttcctggataagggtcatgtggtagtgagggcgggtaacaac
gaggtgaagactcaaaagacctacaacgatgacaacgatcattatgtaactctgtacagc
aacaacaacaggttgcgtgtctatgtggatgacgtcctggagaagaatggggatacgggt
ggtggagggggcagcagccgggtggcactgtcacctggaggggtctacctgggaggaaca
cctgacaacagcctcaacaacctcaccggctgtcttagcaacctgttcatcaagagagac
aagccttctcagatggtgatgaatctgatgaatgttaacgagaacatcaacgttcctcta
gaatgtcccgctgccaataaacctcaacagatcctggccacaccaccacgacaaaagcat
gttaagggtaaacacaggaagcctgcgggtggtgctgggtcaagggggcggagtcgcagt
gccagggagtcctgccagggggacctaaccaatcaggaggttggagctctgcacttcagt
ggctcctcccacagccaccagcgctacgacaggctaccagaggccttcagcaggacgcct
cacatctccatgggtctacgtgtgaactcctcagaaggcctggtgttctgtgtgtctgga
tcaggagagcgtagcagctctgtgatgaccctgtctgtctccgacggacgcctgctgctc
ctcgtcgacggagggaagaggaagactagcattcgctcgcgcaggaagtacaacgacgga
cagtggcacacggtgtttgtgaagagggagggagagaaggccagtttgattgttgatggg
atcaatgcccagtccaagagggtctcaggaggggagaaacccccccttagttcccctctc
tacatcggaggagttccctcagcagtcgccagctcacttctcacggtgccaggtcctgga
gggtttgtgggctgtgtgagggacctggagctgaatgaggagagcccagccaatccctcc
acaagcctgggggttgtaccttgcttccagaccaatctgcagcctggggcatacttctcc
tcccagggaggacacatggctatagatgagggcctggtgttagggcgggaccttgaggtc
cagctggaggtacggctggtgtcggactctggtctcctgctgcatgctgggtctaggcaa
cagctcagtctctacctcaaccagggaaaggtgacagtcacagtgaacagtggtcacgga
gaattctccacctctttcacaccagaggaatccctgtgtgacggacactggcacagtatc
acagttatgaagaggaacaatgtgctccagctccatgtggatgcagacagtgaacacagt
gtgggacccaagcagggccgatcctcaggggccaaggagactgtgtacctggggggagta
ccagatggcgttgatgtgccgggtctccccgctgccctgccctccttccatggttgtgta
cgtagagcagtcctgaaccagcgaccagccgtgctgtctaaacccctgttagtatacgga
gctgtgggcacacagggctgtccagccatgtag
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integrated database retrieval system
