Salvelinus namaycush (lake trout): 120060799
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Entry
120060799 CDS
T07522
Name
(RefSeq) troponin C, skeletal muscle-like
KO
K12042
troponin C, skeletal muscle
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04814
Motor proteins
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120060799
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120060799
04820 Cytoskeleton in muscle cells
120060799
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120060799
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
120060799
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
AIF-1
EF-hand_9
EF-hand_FSTL1
EH
SPARC_Ca_bdg
SAPC2_N
EcoRI_methylase
Motif
Other DBs
NCBI-GeneID:
120060799
NCBI-ProteinID:
XP_038866148
UniProt:
A0A8U1GX55
LinkDB
All DBs
Position
Sna16:44151263..44155285
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AA seq
161 aa
AA seq
DB search
MPTETQSDARSFLSEDMIAEFQAAFNLFDSDGGGDISTRELGQVMRMLGQNPTREELALI
IEEVDEDGSGSIDFEEFLVMMVRLLKEDQAGKSEEELSEVFRIFDKNGDGFIDREELNDI
LAATGEPVTEEECIELMTDADLNKDNRLDFDEFLKMMENVQ
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atgcctactgaaacacagagtgacgcccgctccttcctgagcgaggatatgattgccgag
ttccaggctgccttcaacctgttcgacagtgacggtggcggtgacatcagcaccagggag
ttgggtcaggtgatgaggatgttgggccagaacccgaccagagaggagttggccctgatc
atcgaggaggtcgatgaggatggtagcggcagcatcgacttcgaggagttcttggtcatg
atggtgaggctcctaaaggaggaccaggccggaaagtccgaggaagagttatcagaagtc
ttccgtattttcgacaaaaatggcgacggttttattgaccgtgaggagttaaatgacatc
ttggccgccactggagagccagtcacagaggaggaatgtatcgagctaatgacagacgca
gacctaaacaaagacaacaggcttgattttgatgaatttctgaaaatgatggagaatgta
cagtaa
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