Salvelinus namaycush (lake trout): 120061066
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Entry
120061066 CDS
T07522
Name
(RefSeq) LOW QUALITY PROTEIN: tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04210
Apoptosis
snh04517
IgSF CAM signaling
snh04530
Tight junction
snh04540
Gap junction
snh04814
Motor proteins
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120061066
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120061066
09143 Cell growth and death
04210 Apoptosis
120061066
09144 Cellular community - eukaryotes
04530 Tight junction
120061066
04540 Gap junction
120061066
09142 Cell motility
04814 Motor proteins
120061066
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120061066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120061066
03036 Chromosome and associated proteins [BR:
snh03036
]
120061066
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120061066
04147 Exosome [BR:
snh04147
]
120061066
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120061066
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120061066
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120061066
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120061066
Exosomal proteins of other body fluids (saliva and urine)
120061066
Exosomal proteins of colorectal cancer cells
120061066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
120061066
NCBI-ProteinID:
XP_038866508
UniProt:
A0A8U1GXT5
LinkDB
All DBs
Position
Sna16:15415280..15417269
Genome browser
AA seq
457 aa
AA seq
DB search
MSPSSPXRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKAIGGGDDSFNTFFS
ETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI
IDLVLDRVRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPA
PQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQI
VSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNA
CFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVG
INYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGME
EGEFSEAREDMAALEKDYEEVGVDTVEGDGQEEGEEY
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctcttcaccctagcgcgagtgcatctctatccacgtgggtcaggctggtgtc
cagattggcaatgcgtgctgggagctctactgtctggagcatgggatccagccggatgga
cagatgccatccgacaaagccatcggaggtggagacgactccttcaacaccttcttcagt
gagactggggctggaaagcatgttcccagggctgtgtttgtagacctggaaccgacagtc
atagatgaggtgcgcactgggacctaccgccagttattccatcctgaacagctcatcact
ggcaaagaggatgctgccaataattacgcccgtggacactacactattggcaaagagatc
attgacctggtgctggacagggtccgcaaactgtctgaccagtgcacaggccttcagggc
ttcctggttttccacagctttggaggtggcaccggctctggtttcacctctctgctgatg
gagcgcctgtctgttgactacggcaagaagtccaagctggagttctccatctacccagct
ccccaggtgtccacagctgtggtggaaccttacaactccatcctgaccacccacaccacc
ctagagcactctgactgtgctttcatggtggataatgaggctatatatgacatctgccgt
aggaacctcgacattgagcgtcccacctacaccaacctcaacaggctcattagccagatt
gtttcctccattactgcttcccttcgattcgatggtgctctcaatgttgatttgacagag
ttccagaccaacttggtgccctatccacgtattcattttcctctggccacctatgcccca
gttatctctgcagagaaggcttaccatgaacagctctctgtggctgaaatcaccaatgcc
tgctttgagccggccaatcagatggtgaaatgtgaccctcgccacggcaagtacatggca
tgttgtcttctttaccgtggtgatgtggtgccaaaagatgtcaatgctgctattgccacc
atcaagaccaaacgttctattcagtttgttgactggtgcccaactggttttaaggttggc
atcaactatcagcctcccactgtggtccctggtggagacctggccaaagtccagagggct
gtgtgcatgctaagcaacaccactgctattgcagaggcctgggctcggcttgatcacaag
tttgatttgatgtatgctaaacgtgcctttgtgcactggtatgtgggtgagggcatggag
gagggagagttctctgaagccagagaggacatggcagccctggagaaggattacgaagag
gtgggggttgacaccgtcgagggtgacggacaggaggagggagaggagtactga
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