Salvelinus namaycush (lake trout): 120061470
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Entry
120061470 CDS
T07522
Name
(RefSeq) troponin C, skeletal muscle-like
KO
K12042
troponin C, skeletal muscle
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04020
Calcium signaling pathway
snh04814
Motor proteins
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120061470
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120061470
04820 Cytoskeleton in muscle cells
120061470
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120061470
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Troponins
120061470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_5
EF-hand_9
EF-hand_FSTL1
AIF-1
EH
EF-hand_11
SPARC_Ca_bdg
SAPC2_N
TerB
EF_EFCAB10_C
EMG1
EF-hand_EFHB_C
Motif
Other DBs
NCBI-GeneID:
120061470
NCBI-ProteinID:
XP_038867234
UniProt:
A0A8U1F0E5
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All DBs
Position
Sna16:44159173..44161719
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AA seq
160 aa
AA seq
DB search
MTDAQQEARSYLSEEMLNEFKAAFDMFDTDGGGDISTKELGQVMRMLGQNPTREELDEII
EEVDEDGSGTIDFEEFLVMMVRLLKEDQAGKSEGELAECFRVFDKNADGYIDREEFAIII
RSSGEQISEEEIDELLKDGDKNADGMLDFDEFLKMMENVQ
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgactgacgcgcaacaggaggcccgctcatacttgagcgaggagatgcttaacgagttc
aaggctgccttcgacatgtttgacaccgacggtggcggtgatatcagcaccaaggaattg
ggtcaggtcatgaggatgttgggccagaatccgacaagagaggagttggatgaaatcatt
gaggaggtcgatgaggatggtagcggaaccatcgacttcgaggagttcttggtcatgatg
gtgaggctcctaaaggaggaccaggccggaaagtcagagggagagttagcggaatgtttc
cgtgtgttcgacaagaatgccgacggctatatcgacagagaagagttcgccatcatcatc
cgcagctctggcgaacaaatctcagaggaggaaattgatgagctgctgaaggatggagac
aagaacgctgatggcatgctggactttgacgaattcctcaagatgatggaaaatgtgcag
taa
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