Salvelinus namaycush (lake trout): 120062677
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Entry
120062677 CDS
T07522
Symbol
pomt1
Name
(RefSeq) protein O-mannosyl-transferase 1 isoform X1
KO
K00728
dolichyl-phosphate-mannose-protein mannosyltransferase [EC:
2.4.1.109
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00514
Other types of O-glycan biosynthesis
snh00515
Mannose type O-glycan biosynthesis
snh01100
Metabolic pathways
Module
snh_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
120062677 (pomt1)
00514 Other types of O-glycan biosynthesis
120062677 (pomt1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120062677 (pomt1)
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.109 dolichyl-phosphate-mannose---protein mannosyltransferase
120062677 (pomt1)
Glycosyltransferases [BR:
snh01003
]
O-Glycan biosynthesis
O-linked Man type
120062677 (pomt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMT
PMT_4TMC
MIR
Motif
Other DBs
NCBI-GeneID:
120062677
NCBI-ProteinID:
XP_038868652
UniProt:
A0A8U1H4M4
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Position
Sna18:10495448..10513371
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AA seq
722 aa
AA seq
DB search
MLTSIKLPIVIRAEINLVLVVVTALGLLSRLYGINFPKAVVFDEVYYGQFVSLYTKQVFF
IDESGPPLGHMILAFGAYLGGFDGNFIWNRIGAEYSSNVPVWSLRLIPALAGSLCVPLCY
LLVVELGYSHLTALGAALLFLMENSLIVQSRFMLLESVLIFFLLLAVVSYLRFHNAQRGS
PVSLAWLVLTGVTCACAVGVKYMGLFTYFLLLGLAAVHTWQLIGDRALRNSVVLMQVVTR
FLALVVLPLLLYLGFFYVHLNLLYRSGPHDQMMSSAFQASLEGGLARITQGQPLEVVYGS
QVTLRSVSSKPIPCWLHSHKANYPIRYENGRGSSHQQQVTCYPFKDVNNWWIIKDPGRQD
LVVSSPPRPVRHGDVVQLLHGMTSRLLNTHDVAAPMSPHAQEVSGYIDFNVSMPAQNLWK
VDIANREAEQDVWKTILSEVRLIHINTSAVLKLSGSSLPEWGYRQLEVVGDKIYKGYQPS
GVWNVEEHRYGRSLEQRERELELHSPTHIDINRNLTFVAKFLELQWKMLTVKHEDSEHKY
SSSPLEWITMNTNIAYWLHPASNAQIHLIGNFVTWTLANLALVVYVLLFLSYLLRRRRKI
EDIPEASWCQLLQAGVVCAGGWAVNYLPFFMMEKTLFLYHYLPALTFQILLIPVVLEHLH
THMLRCASLRCALHGVVLAGLSSVYLSFRTFSPLTYGQPELSAEQLASLRWRDSWDILFR
RR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgtctatcaagttgcctattgtgatcagagccgaaatcaacttggttttggtg
gtggtgacagcccttggacttttgtccagactgtatggaattaacttccctaaagctgta
gtgtttgatgaggtgtactatggacagtttgtatctctctacacaaagcaggtcttcttt
attgatgagagtggtccacctcttggtcacatgattctagcatttggagcttatcttggt
ggatttgatggtaactttatctggaacaggattggagcagagtactccagtaatgtgcct
gtatggagtttaagactgataccggccctggcggggtcactgtgtgtacccctgtgttac
cttctggtagtggaactcgggtactcacacctcacagcactgggggctgcattgctcttc
ctcatggagaattccttgattgttcagtcccgcttcatgctgctggaatctgtgcttatc
ttcttcctgctgctcgctgtcgtatcctacctcagatttcacaatgcacaacgcggctca
ccagtcagtttggcgtggctggtgctgactggagtcacatgtgcctgtgctgtgggagtg
aagtacatgggtctgttcacctactttctgctgctgggcttggcggccgtgcacacgtgg
cagcttattggggacagagcactgagaaatagtgtggtgctgatgcaggtagtgacccgc
ttcctggccctcgtggtcctacccctactgctctacctgggcttcttctatgtgcatttg
aacctgctctaccgcagtggcccacacgaccagatgatgagcagtgccttccaggccagc
ctagagggaggattggccaggatcactcagggtcagcctctggaggtggtctatggctct
caggtgaccctccgcagtgtctccagtaaacccataccctgctggctacactcccataag
gccaactatcccatcaggtatgaaaatgggcgtggtagctctcaccagcagcaagtgacc
tgttatccgttcaaagatgtcaacaattggtggataatcaaagatccaggcagacaagac
cttgttgtgagcagccctccccgccctgttcgccatggtgatgttgtccagcttcttcac
ggcatgacctcccgtctcctcaacacgcacgacgttgcagctcccatgagtcctcacgca
caggaggtgtctggctacattgacttcaatgtgtcaatgccagcccagaatctctggaaa
gtggacattgcgaacagggaggcggaacaagatgtctggaagactattctctctgaagta
cgtttgattcacatcaacacctcggctgtgctcaagctgagcggttcttcccttccagag
tggggctacaggcagctggaagtggtgggggataagatctacaagggctaccagcccagc
ggtgtttggaatgttgaggagcaccgctacggcaggagtctggagcagagagagcgagag
ctggagctacactcccccacacacattgacatcaaccgcaacctcaccttcgttgcaaaa
ttcctggagctacagtggaagatgctgacggtaaagcatgaggattctgaacacaagtac
agctcttcacctctagaatggatcacgatgaataccaacattgcgtactggctccacccc
gcgagcaatgcccagatccacctgattggcaactttgtcacttggaccctggcaaacctc
gcccttgtggtgtacgtccttcttttcctatcgtatctattaaggaggcgacggaaaatt
gaagacattccagaagcctcctggtgccagctgcttcaggcaggagtagtgtgtgctggt
ggctgggctgtcaactacctgcccttcttcatgatggagaagacactgttcctgtatcac
tacctgccagctctcaccttccagatcctgctgatccctgtggttctggagcacctgcac
acacacatgctgaggtgtgcttctctccggtgtgctcttcatggagttgtattggcaggg
ttgtcctcagtatatctgtccttccggaccttcagtcctctcacctatggtcagccagaa
ctgagcgccgagcagctggcttcgttgcgctggagggacagttgggacatcttgtttcgc
agacgttaa
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