Salvelinus namaycush (lake trout): 120064016
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Entry
120064016 CDS
T07522
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120064016
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120064016
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
IQ
PFF1_TM
GPHH
FraC
ATP-synt_B
New_glue
Motif
Other DBs
NCBI-GeneID:
120064016
NCBI-ProteinID:
XP_038870254
UniProt:
A0A8U1H3P5
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All DBs
Position
Sna19:complement(38804538..38835881)
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AA seq
1991 aa
AA seq
DB search
MAQLLVPPGPDSFLLFCRESLDAIERRIAEENAKKPKGKPNDDDDNGPKPSSDLEAGKSL
PLIYGDIPKGLVSTPLEDLDTFYSNQKTFIVLNRGKAIFRFNATPALYVLSPFNPLRRIS
IKVLVHSLFSMVIMFTILTNCAFMTLSQPPDWAKNIEYTFTGIYTFESLIKILARGFCVG
KFTFLRDPWNWLDFCVIVMAYVTSFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALI
QSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRNKCLRIRPNSTNLLNDTLDFNGKEYND
ADFNETVAVNWTNYTNNPDNYYYLPGKRDALLCGNGSGAGLCPEGFWCVKAGRNPDYGYT
SFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVA
MAYDEQNQATMEEAQKKEEEFQAMLEQLRRQQEDAQAAATVMAAESGEFSERGDLTETSS
EASKLSSKSAKERRNRRKKRKQREEEEREDNDKCHRSESESSMKKSHFRFSMDASNLHNY
DMSCSTPYQSFLSIRGPLFSSRRNSRASLYSFRDRARDIGSENDFADDENSTFEDNDSRR
GSLFVPRRSDRRSSNVSQNSMPSHVLLPANGKMHSSVDCNGVVSLVGGASLPKSPEGLLL
PEENPTETEYRTARYGSYQASMDFLEDPVARQRALSVASVITNTMEELEESRQKCPPFWY
KFANTFLIWDCCPKWLRIKKIVNMIVMDPFVDLAITICIVMNTVFMAMEHYPMSGEFNTM
LYVGNLVFTGIFTAEMCFKIIALDPYIYFQEGWNIFDGIIVSLSLMELGLANVSGMSVLR
SFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRDC
VCKISTDCTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVADQSMCLIVFLMVMVIG
NLVVLNLFLALLLSSFSADNLAATDDDSEMNNLTVAIGRIHQGIAFVKALVRRSFQSICL
RKKKRSLNEDKTLDDLHKTMGTNWNSNHTTVEIMKDPDYIKGGNGATSGLGVGVGSNAAG
KYIMNDNTDYMPFIHNASLTVTVPIAVGESDLNTEDFSSDSSDIEESKEQLSEDHPLSSS
EGSTVDIRPPGEGEGSVDMEPEESMEPEGCFTDGCVRRFQCCQVNVDEAKWKMWWTLRKT
CFRIVEHNWFESFIIFMILLSSGALAFEDIYIEKRKTIKTVLEFADKVFTYIFILEMLLK
WVAYGFAKYFTNAWCWLDFLIVDVSLVSLVANALGYAELSAIKSLRTLRALRPLRALSRF
EGMRVVVNALLGAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNITTQERFKVRDV
ANKTECLALEGAYWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLEDQPDYE
VNLYMYMYFVVFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKL
GSKKPQKPIPRPANKFQGYVFDFITKQAFDIVIMILICLNMVTMMVETDDQTDDMDGILY
KINLVFIVMFTGECVLKMFSLRQYYFTIGWNVFDFIVVILSIIGMFLSELIEKYFVSPTL
FRVIRLARIGRILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAY
VRKESGIDDMFNFETFGNSMICLFQITTSAGWDGLLAPILNKREPDCDSRKEHPGSKYKG
GDCGNPLVAIIFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWE
KFDARATQFMEYEKLSDFADALDPPLRISKPNKIQLIYMDLPMVSGERIHCLDILFAFTK
RVLGEGEGLDILRGQMEERFMASNPSKVSYEPITTTLRRKQEDMSALVIQRAFRRYLLRR
IVKRASAMYKEKMLLDKEVLVIDKFNEISTSDRTDMTSSTASPLSYDSVTKPEKNKYEKD
KREKEVKKKKK
NT seq
5976 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgccaggaccagacagcttcctcctgttttgtcgtgagtcc
cttgatgccatcgagaggcggatcgctgaggagaacgccaagaaacccaaggggaagccc
aatgacgatgacgacaacggacccaagcccagcagtgacctggaggcaggcaaatcactg
ccactcatatacggggacattcccaaaggattggtgtccacaccactggaggacctggac
accttctacagcaatcagaaaacctttatagtattgaaccgagggaaggccatcttccgc
ttcaacgccactcctgccttgtatgtcttaagccccttcaaccctcttagaagaatatca
attaaggttttggttcactcattgttcagcatggtaatcatgttcactatccttaccaat
tgtgcgtttatgaccctgagtcagcccccggactgggcaaagaatatagagtacacattc
actggaatttatacatttgaatctcttataaaaatattggcaaggggcttctgtgtcggg
aagttcacctttctacgagatccatggaactggttggatttctgtgtcattgtcatggca
tatgtcacatcgtttgtggacctgggcaatgtgtcagcactgagaacgttcagggttctc
cgagcactgaaaactatatcggtcatcccaggcctgaagaccattgtgggagcgctgatc
cagtcagtgaagaaactgtcagacgtgatgatcctcactgtattctgcctaagtgtcttt
gccctagtagggctgcagctgttcatgggcaatttaagaaacaaatgtttaaggatccgt
cctaactcaaccaacctcttgaatgatacattggactttaatgggaaggagtataatgat
gcggactttaacgagaccgtcgcggtcaactggaccaattacactaataatcctgataat
tattactacctcccaggtaaaagggatgctttgctttgtggaaatggcagtggtgctggg
ctgtgtccagagggattctggtgcgtcaaagcgggccggaacccagactacggctacacc
agctttgacacgttcagctgggccttcctgtctctgttcagactgatgactcaggactac
tgggagaacctctaccagcagaccctgcgggctgctgggaagccgtatatgatcttcttt
gtgctggtcatcttcctgggctccttctacctgatcaacctgatcctggctgtggttgcc
atggcgtacgacgagcagaaccaggccaccatggaggaggctcagaagaaggaggaggag
ttccaagccatgctggagcagctgaggagacagcaggaggatgcacaggcggcggcaacg
gtgatggcagctgagagtggggaattcagtgagagaggggacctcactgagacctcctca
gaggcctccaaactcagctccaagagcgccaaagagaggcgcaacaggcgcaagaagagg
aagcagagggaggaggaggagagagaggacaatgacaagtgtcacaggtctgagtccgaa
agcagtatgaaaaagagtcacttccgcttctccatggatgcctctaacctgcacaactat
gacatgagctgttcaacaccataccagtccttcctgagtatccgcggacccctgttctcg
tccagacggaacagccgggctagcctctacagcttccgggaccgtgcgcgggacataggc
tcggagaacgactttgccgacgacgagaacagcactttcgaggacaacgacagtcgccgg
ggctctctgtttgtccctcggcggagcgaccggcgctccagtaacgtgagccagaacagc
atgccatcacacgtcctgctgccagcaaatgggaagatgcacagctccgtcgactgcaac
ggggtggtgtccctagtgggcggggcttcactccccaagtcacctgagggactccttctg
ccagaggaaaacccgacggagacagagtatagaacggcccgatatggatcgtaccaggcc
tctatggacttcctggaagaccccgttgccagacagagggcgctcagtgtagctagtgtt
ataaccaacactatggaagaacttgaagaatcgagacagaagtgccctcctttctggtac
aagtttgccaacaccttcctcatctgggactgttgtccgaagtggctgaggatcaagaaa
atagtcaatatgatcgtgatggacccgtttgtagacctagctatcaccatatgtattgtt
atgaacacagtgttcatggctatggagcattacccaatgtctggggagttcaacaccatg
ctttatgtgggaaacctggtgttcacaggtatcttcacagctgagatgtgtttcaagatt
attgctttggatccatacatttattttcaggaaggctggaatatatttgatggtatcatt
gtcagtttgagcttgatggagcttggcttggccaacgtgtctggaatgtctgtcctcaga
tcattccgattgctgagagtattcaaactggccaagtcttggcccacactgaacatgctg
atcaagatcattggtaactcagtgggggctctgggtaatctcaccctcgtactggccatc
attgtcttcatcttcgccgtggtgggcatgcagctttttgggaagagctacagagactgt
gtgtgtaagatctcaacagactgcacactgccccggtggcacatgcatgacttcttccac
tccttcctgattgtgttccgggtgctgtgtggggagtggatcgagaccatgtgggactgt
atggaggtggctgatcagagcatgtgtctcatcgtcttcctgatggtcatggtcatcggg
aacctagtggtcctgaatctgttcctggccttgctgctgagctcgttcagtgctgataac
ctggcggccacggatgatgacagcgagatgaacaatctgacggtggccataggccgcatc
caccagggcatcgccttcgtcaaggccttggtgcgccgctctttccaaagcatctgtctg
aggaagaagaagaggagcctgaacgaggacaagaccctggatgacctccacaaaaccatg
gggaccaactggaactccaaccacaccactgtggagatcatgaaagaccccgattacata
aagggtggcaatggcgccaccagtgggttgggagtgggggtgggcagcaatgcagcaggg
aagtacataatgaatgacaacactgactatatgccgttcatccacaacgccagcctgacc
gtcacggtgcccatcgctgtgggagagtcggacctcaacactgaggacttcagcagtgat
tcctcggacatagaggaaagcaaagagcagctatctgaagaccatccgctgagctcctca
gagggcagtacagtggacattaggcccccaggagagggagagggctcggtggacatggag
cctgaggagtccatggaacctgaaggctgcttcactgatggatgtgtccgcagattccaa
tgctgccaagtgaacgttgatgaggccaagtggaagatgtggtggacgttgagaaaaact
tgttttaggatagtggagcacaactggtttgagagctttatcatcttcatgatcctgctc
agcagtggagcgctggcatttgaggacatctacatcgagaagaggaagactattaagact
gtgttggagtttgcagacaaagtcttcacctacatcttcatcctggagatgttgctgaag
tgggtggcctatggattcgccaaatacttcaccaacgcttggtgctggctggacttcctc
attgtcgacgtgtctcttgtcagccttgtggccaacgccctgggctacgctgagctgagt
gccatcaagtccctgaggactctacgagcactgaggcccctgagagcgctgtcccgcttc
gagggcatgagggtggtggtcaacgctctgctcggagccatcccctccatcttcaatgtg
ctgctggtctgcctcatcttctggctcatcttcagtatcatgggcgtcaacctgtttgcg
gggaaatactaccattgtgtcaacatcaccacacaggagcgcttcaaagtcagagacgta
gctaacaagacagaatgtttggctttggaaggtgcctactggaagaatgtgaagatcaac
tttgataatgtgggagcaggctatctggcactgttacaagtggctacattcaaaggctgg
atggacatcatgtatgcagctgtggactctcgcaatttggaagatcaacccgactatgaa
gttaatctgtacatgtatatgtactttgtggtattcatcatatttggatccttctttaca
ctcaacctcttcattggtgtcattatagacaacttcaatcagcaaaagaaaaagtttgga
ggtcaagacatcttcatgacagaggaacagaagaaatactacaatgctatgaagaagctt
ggctcaaagaaaccccaaaagcctatccctaggccagcgaacaagtttcaaggatatgtc
tttgatttcattacaaagcaagccttcgacattgtcatcatgattcttatatgccttaat
atggtcaccatgatggtggagacagacgaccagacggacgacatggatggaattctctac
aagatcaacctggtgtttattgtcatgtttaccggagagtgtgttctgaagatgttctca
ctccgccaatactacttcaccattgggtggaatgtatttgactttattgttgttatcctg
tcgataattggtatgtttctgtctgaactgatagagaagtactttgtttcaccaacctta
ttccgagtcattcgactggcccggattggtcgcatccttcgcctcatcaagagtgccaag
ggaatccgtacactcttgtttgctttgatgatgtcacttcctgccttgttcaatattggt
ctcctcctcttcttagtgatgtttatctatgccatctttggcatgtcgaactttgcatac
gtcaggaaggagtctgggattgacgacatgttcaactttgagacatttggcaacagcatg
atttgcctgttccagatcaccacgtcagctggctgggacggcctgctggcacccatccta
aacaagagagagccagactgtgacagccgtaaagagcacccaggcagcaagtacaagggg
ggagactgtgggaacccccttgtagccattatcttctttgtgagctacatcataatctgt
ttcctcattgtggtcaacatgtacattgctgtcatcctggagaacttcagtgtggccact
gaggagagcgctgagcccctgagcgaggatgactttgagatgttctacgaggtctgggag
aagtttgatgcacgggccacccagttcatggagtatgagaagctgtctgacttcgctgat
gccttggaccccccgctacgcatttctaagcccaacaagatccagttgatctacatggat
ttgcccatggtgagtggggagcgcatccactgcctggacatcctgtttgccttcaccaaa
cgtgtcctgggcgagggcgaaggcttggacatcctccggggtcaaatggaggagcgcttt
atggcctccaacccctccaaggtgtcctacgaacccatcaccaccacgctacgccgcaaa
caagaagacatgtctgccctggtaattcagagagctttcagacgatatctgctcagacgt
attgttaaacgggcctctgccatgtacaaagagaagatgctccttgataaagaggttctc
gtcatagacaaatttaacgagatctctacttcagacagaactgacatgacatcctccaca
gcctctcccctatcatatgacagtgtaacaaaaccagagaaaaacaaatatgaaaaagac
aagagagagaaggaggtgaagaagaaaaagaagtga
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