Streptococcus pneumoniae AP200 (serotype 11A): SPAP_1120
Help
Entry
SPAP_1120 CDS
T01309
Name
(GenBank) DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)
KO
K03086
RNA polymerase primary sigma factor
Organism
snp
Streptococcus pneumoniae AP200 (serotype 11A)
Pathway
snp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
snp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SPAP_1120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snp03021
]
SPAP_1120
Transcription machinery [BR:
snp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SPAP_1120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DBD_HTH
DUF2316
DprA_WH
Motif
Other DBs
NCBI-ProteinID:
ADM84709
LinkDB
All DBs
Position
complement(1066888..1067997)
Genome browser
AA seq
369 aa
AA seq
DB search
MATKQKEVTTFDVQVAEFIRNHKQKGTATDDEINASLVIPFTLDADGIEDLLQRIQDAGI
SITDNEGNPSARVLSNEEEPELSDEDLIGSTSAKVNDPVRMYLKEIGVVPLLTNEEEKEL
ALAVEAGDIEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYSKG
FKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQIA
ERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRIVLREQL
DEILDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRQPSRS
KPLRDFIED
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaacaaaaagaagtaacaacatttgacgtacaggtagcagaatttatccgt
aatcataagcaaaaagggacagcaacagatgatgaaatcaatgcaagtctggttattcct
tttaccttggacgctgatgggattgaagatctcttgcaacggattcaggatgcaggcatt
tctatcacagataacgaaggaaatccaagtgcgcgtgttcttagcaatgaagaagaacca
gaactcagcgatgaggacttgattgggtcaacttctgctaaggtcaatgaccctgtccgt
atgtacttgaaagaaataggggtcgttcctctcttgaccaatgaagaggagaaagagttg
gcactggctgttgaagctggcgatatcgaagccaaacaacgtcttgcggaagccaatctt
cgtttggttgtttctattgccaaacgctatgtcggtcgtggcatgcagttccttgacttg
attcaagaaggaaatatgggcttgatgaaggcggttgacaagtttgactattctaaaggg
ttcaagttttcaacttatgcaacttggtggattcgtcaggctatcactcgtgctattgcg
gatcaagctcgtaccatccgtatcccagttcacatggttgaaactatcaataaattggtt
cgtgaacagcggaatctccttcaagaattggggcaagatccgacaccagaacagattgct
gaacgaatggatatgacacctgataaggttcgtgaaatcttgaagattgcccaagaacca
gtatctcttgaaactcctatcggtgaagaggacgatagccaccttggagactttatcgaa
gatgaagtaattgaaaatccagtggattatacgactcgtatcgtcttgcgtgagcaattg
gatgaaatcttagatactcttacagaccgtgaagaaaatgttctgcgtctacgttttgga
ctagatgatggaaaaatgcgcacacttgaagatgtggggaaagtctttaacgtaactcgt
gagcgtatccgtcagattgaagcaaaggctttgagaaaactacgccaaccaagccgcagc
aaaccgcttcgtgattttattgaagactaa
DBGET
integrated database retrieval system
