Candidatus Schneideria nysicola: KEC38_00865
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Entry
KEC38_00865 CDS
T07486
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sny
Candidatus Schneideria nysicola
Pathway
sny03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KEC38_00865 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sny03400
]
KEC38_00865 (ung)
Enzymes [BR:
sny01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KEC38_00865 (ung)
DNA repair and recombination proteins [BR:
sny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KEC38_00865 (ung)
Prokaryotic type
KEC38_00865 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UAJ66217
LinkDB
All DBs
Position
complement(171783..172451)
Genome browser
AA seq
222 aa
AA seq
DB search
MKEKLSWKDFFEEEKKLNYFKNILDNIIRARSLGIKIYPRQQDIFNAFHYTELHEVKVVI
IGQDPYHGPHQADGLAFSVRHGVPIPPSLRNIYKELSQDVPNFIRPNHGCLYSWSKQGVM
LLNSILTVESGKAGSHANLGWLTFTNKVIDIINYYLEDIIFLLWGSYAQKKGKIINRKKH
IVLNAAHPSPLSNRSFLGSHHFSTVNKILLTRKKSIIDWSIY
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaaattatcttggaaagatttttttgaggaagaaaaaaaattaaattatttt
aaaaatatattagataatattattagagcgcgttctttaggaataaaaatatatcctcga
caacaagatatatttaatgcttttcattataccgaattacacgaagttaaagtagttatt
attggacaagatccttatcatggtccccatcaagcggatggattagctttttctgttaga
catggggtacccattcctccttcattaagaaatatttataaagaattatctcaagatgta
cctaattttattaggcctaatcatggatgtttatatagttggtctaaacaaggtgtaatg
ttattaaattctatacttaccgttgaatcagggaaagctggctcccacgctaacttagga
tggctaacctttactaataaagtgatagatataattaattactacttagaagatattatt
tttttactatggggaagttatgcgcaaaaaaaaggaaaaattataaatagaaaaaaacat
attgttttgaatgccgctcatccttcccctctttctaatcgtagttttttaggatcacat
catttttctactgttaataaaattttacttacaagaaagaaatctataatagattggtct
atatattaa
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