Streptomyces nigra: DC008_11260
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Entry
DC008_11260 CDS
T05839
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
snz
Streptomyces nigra
Pathway
snz00550
Peptidoglycan biosynthesis
snz01100
Metabolic pathways
snz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DC008_11260 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DC008_11260 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snz01011
]
DC008_11260 (mrdA)
Enzymes [BR:
snz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DC008_11260 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
snz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
DC008_11260 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AWE50243
UniProt:
A0A2S1IC90
LinkDB
All DBs
Position
complement(2436268..2438526)
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AA seq
752 aa
AA seq
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MSNIPETGRTPRVQIRLVVIQILVLSLLGTLGGRLWYLQIREGEAYAKEASGNHVQQVVQ
PAVRGSILDARGVPLADNETRLVVSASRTDLLKMPDDGKAVLAKLAGVLGMKPAEVMEKV
RLCDSKTPQPCWNGSPYQPIPITDEATPKQALQIRERAEDFPGITAEPQALRRYPSPGGA
NTAQVLGYLSPVTDEELQQAQDTDSPYLRSDQVGRSGLERQYDKALRGKAGVTRYEVDNL
GRVIGEAEADPAQPGANLVTSIDARVQRVAEYELNEAMKQARKEWDRNTNEPYKADSGAV
VVMEAKTGRIVAMASNPTYDPNAWVGGISAKDYKQLTGKSSNYPLLNRAIQGQSAPGSIF
KVIPTAAAVNAGYSFDGPYECSSSYSIGGQVFKNFESQSYGGISLGRALEVSCDTVFYRL
SHQEWKRDGGTKPKKNAKDWFYKTAHQFGLGAETGIDLPNEVTGRVPDRKWKQDYWKANK
DAWCKYGKKGGSYAEQIAYENCLEGNRLRAGDSVNYSIGQGDTLVTPIQMATIYAAISNG
GTLYDPTVGKAVLSADGRTVEELKPTSHGKLPISRKTLAEMDDALAGVATRGTAAWRFAD
VGWPQDKIPMHAKTGTAEVYGKQTTSWFATYTKDYSVVMTISQGGTGSGASGPAVRNIYD
ALYGVADDGTIDKKNALLPSPQKKLPKVRTDGTISSPKVSKDPAKEQRATQKNETEPDPQ
LAGTVSTQSPENRDTRRRRRRNRRRGSRRMLT
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaacattcccgagaccggccggacgccccgcgtccagatccggctcgtcgtcatc
cagatcctcgtcctctcccttctgggcaccctcggcggacgcctgtggtacctccagatc
cgcgagggcgaggcctacgccaaggaggcgtcgggcaaccacgtccagcaggtcgtccag
cccgccgtccgcggctcgatcctggacgcccgcggcgtgcccctcgcggacaacgagacc
cggctcgtggtctccgcctcccgcaccgacctgctgaagatgcccgacgacggcaaggcc
gtcctcgccaagctggccggcgtgctcggcatgaagcccgccgaggtcatggagaaggtc
cgcctctgcgactccaagaccccccagccctgctggaacggctcgccctaccagccgatc
cccatcaccgacgaggccacccccaagcaggccctccagatccgcgagcgcgccgaggac
ttccccggcatcaccgccgaaccccaggccctgcgccggtacccgagccccggcggcgcc
aacaccgcccaggtcctcggctacctctccccggtcaccgacgaggagctccagcaggcc
caggacaccgactccccgtatctgcgctccgaccaggtcggccgctccggcctcgagcgg
cagtacgacaaggcgctgcgcggcaaggccggcgtcacccgctacgaggtcgacaacctc
ggccgggtcatcggcgaggccgaggcggaccccgcccagcccggcgccaacctcgtcacc
agcatcgacgcccgcgtccagcgggtcgccgagtacgagctgaacgaggccatgaagcag
gcccgcaaggagtgggaccgcaacaccaacgagccgtacaaggccgactcgggcgcggtc
gtggtgatggaggccaagaccggccgcatcgtcgcgatggcctccaaccccacctacgac
cccaacgcctgggtgggcggcatctccgcgaaggactacaagcagctcacgggcaagtcc
tccaactacccgctgctcaaccgcgccatccagggccagtcggcacccggctcgatcttc
aaggtcatcccgaccgctgccgcggtcaacgccgggtactccttcgacggcccctacgaa
tgctccagctcgtactcgatcggcggccaggtcttcaagaacttcgagtcccagagctac
ggcggcatcagcctcggccgcgccctggaggtgtcctgcgacaccgtcttctaccggctc
tcccaccaggagtggaagcgcgacggcggcaccaagccgaagaagaacgccaaggactgg
ttctacaagaccgcccaccagttcggcctcggcgccgagaccggtatcgacctgcccaac
gaggtcacgggccgcgtccccgaccgcaagtggaagcaggactactggaaggccaacaag
gacgcctggtgcaagtacggcaagaagggcggctcctacgccgagcagatcgcctacgag
aactgcctcgaaggcaaccggctgcgcgcgggtgactccgtcaactactccatcggccag
ggcgacaccctcgtcaccccgatccagatggccacgatctacgcggccatctccaacggc
ggcacgctctacgaccccaccgtcggcaaggccgtgctcagcgccgacggcaggaccgtc
gaggagctgaagcccacgtcgcacggcaagctgccgataagccgtaagacgctcgccgag
atggacgacgccctcgccggagtcgccacccgcggtaccgccgcctggcggttcgccgac
gtcggctggccccaggacaagatccccatgcacgccaagaccggtaccgccgaggtctac
ggcaagcagaccacctcgtggttcgcgacgtacaccaaggactactcggtcgtcatgacg
atctcccagggtggtacgggttccggcgcctccggccccgccgtccgcaacatctacgac
gccctgtacggcgtcgccgacgacggcaccatcgacaagaagaacgcgctgctgcccagc
ccgcagaagaagctgccgaaggtccgcaccgacggcaccatctcctcgccgaaggtctcc
aaggacccggccaaggagcagcgcgccacccagaagaacgagaccgaaccggacccgcag
ctcgccgggaccgtgtccacccagtcgcccgagaaccgtgacacccggcgccggcggcgc
aggaaccgcaggcggggaagccggaggatgctcacatga
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