Sulfuriroseicoccus oceanibius: G3M56_007625
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Entry
G3M56_007625 CDS
T07818
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
soa
Sulfuriroseicoccus oceanibius
Pathway
soa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
soa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G3M56_007625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soa03021
]
G3M56_007625
03400 DNA repair and recombination proteins [BR:
soa03400
]
G3M56_007625
Enzymes [BR:
soa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G3M56_007625
Transcription machinery [BR:
soa03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G3M56_007625
DNA repair and recombination proteins [BR:
soa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G3M56_007625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
QQL43774
UniProt:
A0A6B3L8K2
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All DBs
Position
complement(1888975..1890048)
Genome browser
AA seq
357 aa
AA seq
DB search
MSTTLARFELPNRLVKNEDTATDTFATFVAEPFESGFGHTIGNSLRRVLLSSLEGAAITS
VKIAGAQHEFTSLPGVVEDVTEIILNLKKVKFSHNSEDKEPRVLTISVDKEGAVTAGDIT
EDNHYGVINKDQVICHLDRKTKFEAELEVRVGRGFNTGEENKTKDMPIGVIAIDSIFSPV
IRVKYAVENTRVGQKTDYDKLILELWTDGRIEPSDAVLQASAILRKHLDVFVNYDDSLVN
FDEAPEAQNEENAELKRLLNMSVNEIELSVRAANCLNNANITSVGQLAMKTEAEMLRYRN
FGKKSLNEIKEKLSELGLSLGMNIDSSLMEGISSISPLASADTYGGLADLINQNLDD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaacactcgctcgattcgaactcccgaaccgcctcgtcaaaaacgaggacacc
gccaccgataccttcgcaaccttcgttgccgaaccatttgaaagcggcttcggtcacacc
atcggcaactccctgcgccgcgttctcctttcatcccttgaaggcgctgccatcacatcc
gtgaagatcgccggtgctcagcacgaattcacctcgcttccaggcgtggtcgaagacgtc
accgaaatcatcctcaacctcaaaaaggttaagttctcccacaacagcgaggacaaagaa
ccacgcgtgctgaccatcagcgtggacaaggaaggtgccgtcaccgctggtgacatcacc
gaagacaaccactacggtgtcatcaacaaagaccaggtgatctgccacctcgaccgcaag
accaagttcgaagccgaactcgaagtgcgcgtcggccgcggattcaacaccggcgaagaa
aacaagaccaaggacatgccgatcggcgtcatcgccatcgactcgatcttctcgcctgtg
atccgcgtcaaatacgccgtggaaaacacccgtgtcggacaaaagaccgactacgacaaa
ctcatcctcgaactctggaccgacggccgcatcgagccatccgacgccgtgctccaggct
tccgccatccttcgcaagcacctcgacgtcttcgtcaactacgacgactcgctggtgaac
ttcgacgaagctcctgaagctcaaaacgaagagaacgctgaactcaagcgcctcctcaac
atgagcgtcaacgaaatcgagctctccgtccgtgccgcgaactgcttgaacaacgcaaac
atcaccagcgttggccagctcgccatgaagaccgaggcagaaatgcttcgctaccgtaac
ttcggtaagaagtccctcaacgagatcaaggaaaagctctccgagcttggcctctcgctc
ggcatgaacatcgactcgtcgttgatggaaggcatcagctcgatcagcccattggcttcc
gccgacacctacggtggtcttgcagacctcatcaaccagaacctcgacgactaa
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