Solenopsis invicta (red fire ant): 105195777
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Entry
105195777 CDS
T03916
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105195777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105195777
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
105195777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_2
TPR_8
TPR_17
TPR_1
TPR_12
TPR_11
TPR_9
ANAPC3
TPR_7
TPR_6
ARM_TT21_C
ChAPs
PknG_TPR
TPR_21
Alkyl_sulf_dimr
BTAD
DUF7017
TPR-S
TPR_10
HrpB1_HrpK
Motif
Other DBs
NCBI-GeneID:
105195777
NCBI-ProteinID:
XP_011159681
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All DBs
Position
4:917253..922999
Genome browser
AA seq
1302 aa
AA seq
DB search
MSDDIKSLLKEARESFKQNEYLEVMKKCKKILKKDKSNYAALVLLARSMQEVEEFKSQVP
LVLQKAVEAQPNNPLAWQGLAAHYEKTPQDHDNWGKLALAYCKLLQLDSESPKFTHFVNK
ISEIVLRIKNDEILSEALNTFSVLREASTKEKINLIDKTLVWVLSEYPNNRLNKHQELYE
SVLASVIKDVELVNRQEYYRKYLKVLYDSNKFSKLLAAAQDMHTQFQQDTCPLEWLCHIY
YEEAALCKNELEFDITQFYESLLKLKTNSEAALIAKAAYLKKTCELTNSRDYLKQVISIN
AQSFYAWLMLSQVYYKLYCWEETENASRKALESIKLCKTTLKDKFQHEIKLRLLEAISRS
SNEQKLLEARHMCQELLNIEPSIQLQVIYARTNILLDEPDAIAILDNLESQDETKFQVLI
LKALHLKKHERYEEAINALELALENSEAWLLFGKIYWDMRDYNHSLMAFLNGVQMDRNNW
ECMVYLGHYYREHNNDLERSRKCYHAALQINPNSEEAGIGLSTTYRLLKNTDANIQLLQK
VTMQGTGPRWAWLQLGLHYLDQGDAGQAITALQHVIRADPNDNHSWESLADAYLVRGAHT
SALKSYQRALQLSPGSLYPLIQLANIKLLIGQHREAKENFESILQNDKQHILALKGLAQA
CLGLARENIAKHLLCRARENLQQATDSLVDAIMIRSDLLCNWKLLGDVCYRIVTMPEKYC
YLRVKSVLIKCDSIETYLNIKGDEILMLSIRCFCRVLSMQDSALLWHDLACCYSMQLNRG
STINKNDVAAKCYAAAKHAVKLCPQSWLHWNLFGVICMSIYVKNYALAQHCFIMAIDIES
NNAVAWSNLGTLYLHLGDVYKANEAFSRAQRADPSYVNSWIGQGLIAEKTLRKEAMDLFR
HSTQLGYHNQAALGYAHWVLTILLNPTMKKDPLLVYVIENMHAIPAAADVLTWYTEREPY
DIYALNTHGLLLERLKLYNTAAKQFAAALKLSEDEERDMISINLARILIQIGKYEEAVTL
CKQVKCANFNSQCHLALSLFKAKQYEESYNTYEAALHWLADTGADKANILCAMAAIAYMF
QGADAVKTLLFQCIQIEPPIVTGFLATAALGILHDDVNLTSLVLNELKSHENHHEYGYHV
VTLSAYHQAIQRDFTQAIRILEKAIFRYPNDVRYWIRLVRVLLLNNNLDIFRKCASTALT
LSRNTSITNIVHVACASAYSHFSTKEGLRQAQKNIFTYPNNVESWANFVAALLSRDVEKD
YTPINSRWILLLISLMRSQFQISENMSQWLLCNEKELNMIST
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatgacataaagagcctgttgaaggaagcccgcgaatctttcaagcaaaatgaa
tatctggaagttatgaagaagtgtaagaagattttgaagaaagacaaaagtaattatgcg
gcgttagttttgctagcccgttccatgcaggaggtggaggaatttaagtcgcaggtgccc
ttggttttgcaaaaagctgtggaggcacaaccaaataatccattggcatggcaaggttta
gcagcacactatgaaaaaactccacaggaccatgacaactggggaaagttggctttagct
tactgcaaactgttgcagttggacagcgagtcacctaagttcacacattttgtgaataaa
atttccgagattgtcttgcgtatcaagaatgatgaaatattgtcagaagcattgaacaca
tttagtgtgttacgagaggcttctaccaaagaaaagataaacttgattgataagacttta
gtatgggttttatcagagtatcctaataatagattaaacaaacatcaagagctttatgaa
agtgtattagcatctgtaataaaagatgtagagctagtgaatagacaagagtattataga
aaatatttaaaggtgttgtatgattcaaataaattttcaaaattattggcagctgctcaa
gacatgcatactcaatttcaacaggatacttgtcctctagaatggttatgccatatttat
tatgaagaagctgcattatgtaaaaatgagcttgaatttgacataactcagttttatgaa
tcacttttaaagctgaaaacaaattctgaggctgcactcattgcaaaggcagcatatttg
aaaaaaacctgtgaattaactaactcacgtgattatttgaagcaagttatctcaataaat
gcacaatcattttatgcttggttaatgttaagccaagtatattataagctttactgctgg
gaagaaactgagaatgcttccagaaaagcactagaatcaataaaactttgtaagacaact
ttaaaagacaaatttcaacatgaaatcaagttaagattgcttgaagcaataagtagaagt
agcaatgagcaaaaattgctagaagcgcgtcatatgtgccaagagttgttaaacatcgag
ccttccatacaattgcaagtgatatacgcacgtacaaatatattattagatgaacctgat
gctatagccatattggataatttggaatcgcaagatgaaactaaattccaagtccttatt
cttaaagcgttgcatttaaaaaagcatgaacgatacgaggaagcaattaacgctctcgag
ctagctttagaaaattctgaagcctggttgctgtttggtaaaatatattgggatatgaga
gactacaatcatagtctaatggcatttctaaatggtgtccaaatggatcgcaataattgg
gaatgcatggtttacctaggacattattatcgcgaacataataacgatctagaacgttca
agaaagtgttaccacgccgcattacaaatcaacccgaattccgaggaagctggtattgga
ctgagcacaacttatcgtcttctcaagaatactgatgccaatatacaattattacaaaaa
gtaactatgcaaggtactgggccgagatgggcctggcttcaactgggtttacactacttg
gatcaaggtgacgcgggtcaagctattacggcattacagcatgtgatcagagctgatcct
aacgacaaccatagctgggaatctctggcggacgcatacctggtacgcggcgctcataca
tcagcactgaaatcgtatcaacgcgcgctacagctgagcccaggatccctttatcctctg
atacaactcgcaaatatcaaactactcattggtcaacatagggaagccaaagaaaacttc
gagagtatattacagaatgacaaacagcatattcttgcattaaaaggtctagcacaagcg
tgtttaggtctggcaagagaaaatatcgcgaaacatcttctatgtcgcgcgagagaaaat
ctacaacaagcaacagacagtctagtagatgctattatgatacgcagtgatctgctttgt
aattggaaattgcttggcgacgtgtgctatagaatagttaccatgccagaaaagtattgc
tatttaagagttaaatctgttttaataaagtgcgacagtatagagacatacttaaatatt
aaaggagatgaaatactcatgttatcaataagatgtttttgtcgagtactatctatgcaa
gattctgcattattatggcatgatttagcgtgttgttattcgatgcaactaaatcgtggt
tctacaatcaataagaacgatgtggcagctaagtgttacgcggctgcaaaacacgccgtt
aaactctgcccacaatcgtggctacattggaatctctttggtgttatttgtatgtcgata
tatgtaaaaaattatgccctagctcaacattgttttattatggcaatcgatatagagtca
aacaatgcggtagcttggagcaatctgggaacattatatttgcatctaggtgatgtctac
aaagcgaatgaagcattttcccgagcgcaacgtgcggatcctagttacgtgaatagttgg
attggacaaggattaattgcggagaagactctgaggaaggaagcaatggatctattccgg
cattcaacgcaattgggttatcataatcaagcggctttaggctatgctcactgggtactt
acaattctcttgaatcccacaatgaagaaagatccactgttggtttatgttatcgagaac
atgcacgcgatacctgcagctgccgacgttcttacttggtatacagaacgtgaaccatat
gacatttacgccttaaatacccatggtttattattggaacgactgaaattgtacaacacg
gcggctaaacaatttgccgcagctttaaaactaagtgaggatgaagaaagggatatgata
tccattaatttagcgcgcatcctgattcaaatcggaaaatatgaagaagcggtaacatta
tgtaaacaagtgaaatgtgcaaattttaattctcaatgccatcttgcattatccttattt
aaagccaagcagtacgaagaatcgtataatacatatgaggcagctttacattggttagca
gacactggggcggataaagctaatatcttgtgcgcgatggccgcaattgcttatatgttc
caaggggcagatgctgtcaaaaccctgctatttcaatgtatacaaatagaaccgcctatc
gtaactggtttcttagcgaccgctgcattaggaattttgcatgacgacgtcaatttgact
tctttggtattaaatgaattaaaatcgcatgaaaatcatcatgaatacggttatcacgtc
gtcacgctgtcagcatatcatcaagctattcagagagatttcactcaagctattcgaata
ctcgagaaagctatttttaggtatcctaatgacgttaggtattggatacgtctcgttcga
gtcttattattgaacaacaatctagatatcttccgtaaatgtgcttcaacagcattaacg
ttaagcagaaatacgtccataactaatattgtacatgttgcttgcgcatcagcatacagt
cacttcagcacgaaggaaggtcttagacaagcccagaaaaacatatttacatatcctaat
aatgttgaaagctgggctaattttgttgcagctcttttatccagagatgtagaaaaggat
tacactccaattaatagtcgatggatattgttgctaatatcactaatgagatcacaattc
caaatttccgaaaatatgtcgcaatggttactttgtaacgaaaaagaacttaatatgatt
tctacatag
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