Solenopsis invicta (red fire ant): 105202872
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Entry
105202872 CDS
T03916
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03013
Nucleocytoplasmic transport
soc03015
mRNA surveillance pathway
soc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105202872
09122 Translation
03013 Nucleocytoplasmic transport
105202872
03015 mRNA surveillance pathway
105202872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105202872
03041 Spliceosome [BR:
soc03041
]
105202872
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
105202872
Spliceosome [BR:
soc03041
]
Common components
Common spliceosomal components
Cap binding complex
105202872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
AATF-Che1
Motif
Other DBs
NCBI-GeneID:
105202872
NCBI-ProteinID:
XP_025996837
LinkDB
All DBs
Position
3:1562972..1572885
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AA seq
794 aa
AA seq
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MSRRRVHEEDDGYDRVYKKRRRVSENQEIEDRLESLILRVGEKSTSSLESNLEGLASVLE
ADLGLFRSKILRILTDCAIKMPEKCTIYTTLVGLLNAKNFNFGGEFVDYMVKNFKDSLKA
CKWDVARYSLRFLADLVNCHVLSCGSLMQLFDNMLDAANEDGVPQVRRDWYVYAVLSTLP
WVGRELYEKKEQELDHLMVTIEIFLNKRSKKHQPALRVWSSDTPHPQEEYLDCLWAQVRK
LRQDNWAEKHIPRPYLAFDSILCEALQHNLPPLMPPPHHESYSYPLPTVVFRMFDYTDCP
AEGPLLPGSHAIERFLIEEHLRQIINNYYFERKDCAAQLLNFPFKAKIPLDYCIVEVIFG
ELFRLPTPKHLEICYGSILIELCKLQPSTMPQVLAQATEILFRRIDSMAATAFDRFVWWF
AYHLSNFQFRWSWEDWDSCLQRDAEHPRPKFIREVLLKALRLSYYQRIRDMMPDSYVELI
PAVPDPVYKYSSEGASSLPGTSAAHELVVSIRRKCTPEEVLNVLNTLPGPRENEETNNYN
PLKIDVFVQTLLNLGSKSFSHSFAAIVKFHYVFKILAETEEAQICILRNMYALWKNHYQM
MVVLTDKFLKTGIIECSAIANWIFSKEMASEFTKLYIWEILHLTIRKMNKHVTKLSTELT
EAREKLRRAESRSGSSSDEEDTNKERNRERPSEDVVERMEEKLEAAQADQKNLFLIIFQR
FIMILSEHLVRCDTDAIDYNTHWYKWTIGRLQQVFLSHQEQVQKYSSTLETLLFTPDLDP
HILDVFHQFVSLRA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtagaagagtacatgaagaggatgatggctacgatcgagtttataagaagcgc
aggagagtatcagagaatcaagagatcgaggatcgtcttgaatctctcatcctccgcgtt
ggagagaagtcaacgtcatctttggagagcaacttagaaggtctggcttctgtattggag
gctgatctgggtttatttcgtagtaaaattcttcggattttaacggattgcgctattaaa
atgcctgagaaatgcacaatttacactaccctcgttggattgttgaacgcaaaaaatttc
aattttggtggagaatttgttgattatatggtgaaaaattttaaggattccttaaaagca
tgcaaatgggatgtggcaagatattcgcttagatttctagctgatttggtaaattgccat
gttttatcatgtggctcattaatgcaattatttgataatatgctggatgctgcaaatgag
gatggtgtgccccaagtgagacgtgattggtatgtttatgctgttctatcgacgctacca
tgggttggtagagaattatatgagaaaaaagagcaagaattggatcatctaatggttaca
atagagatatttttgaataaacgaagcaaaaaacaccaaccggcattgagagtatggtca
agcgacacacctcatccacaagaagagtatttagattgcctgtgggcacaagttcgcaaa
ctgcgacaggataattgggctgaaaagcatattcctcggccatatttggcgtttgattcg
attttgtgcgaagcgttacaacataatttgccacctttgatgccgcctccgcatcatgag
tcttattcttatccgttgccaactgttgtctttcgtatgttcgattatacggattgtcct
gccgaaggaccattgttaccaggaagtcatgctatcgagagattcctgatagaagaacac
ttgcgacagattattaataattattactttgagagaaaagattgtgctgcgcaattgctg
aattttccattcaaagctaaaattcctttggactattgcattgttgaagtaatattcggc
gaattgtttagactgcctactccaaaacatttagagatttgctacggatcaatattaata
gaactctgcaaattgcaaccttcaactatgccacaggtattagcacaagccacggagatc
ctgtttcgtcgtatagacagtatggcggctaccgctttcgaccgttttgtttggtggttt
gcatatcatttaagcaacttccaattccgttggtcgtgggaagattgggattcctgcttg
caacgtgatgcagaacatcccagaccgaaatttatacgcgaggttctgctcaaggctctg
agattgtcatattatcaaaggattcgggatatgatgccagactcatatgtagagttgatt
ccagcagttcccgatcccgtatacaagtattcatctgaaggtgccagttcactccctggt
acatctgcagcccatgaattggtagtttctataaggcgcaagtgtacaccggaggaagta
ttaaatgtattgaatacattacctggtcctagagaaaacgaagagactaataattacaat
ccgttaaagatcgacgtatttgtacaaactttattgaaccttggttcaaaaagtttcagt
catagttttgcagctatagtaaagttccattatgtttttaagattctcgctgaaacagaa
gaagcacagatatgtatattaaggaacatgtacgcgttgtggaaaaatcattatcaaatg
atggtggtactaacggacaagtttttaaaaactggtattattgaatgcagcgctatcgcc
aactggatattttctaaggagatggcatcagagttcacaaaattatatatttgggaaata
ctgcacctgacaatacgtaaaatgaacaagcatgtaacgaagttgagtacggaattaacg
gaggcaagggagaagttgaggagagcggaaagtagatcaggctcctcttcagatgaagag
gacactaataaagagagaaatagggaaagaccatcggaggatgtagtggaacgaatggaa
gaaaaattggaagctgcacaagccgatcaaaaaaatctatttctcatcatatttcagcgt
ttcataatgatcctatcagaacatttagtgcgttgtgacacagatgcaattgactacaac
acacattggtataaatggactataggaagactgcaacaagttttcttatctcatcaagag
caagtacaaaagtattcctcgacattggaaactttacttttcactcctgacttggatcct
catattttggatgtatttcatcaatttgtctctctacgagcataa
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