Solenopsis invicta (red fire ant): 105205270
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Entry
105205270 CDS
T03916
Name
(RefSeq) atrophin-1 isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105205270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soc03400
]
105205270
Enzymes [BR:
soc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
105205270
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
105205270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
105205270
NCBI-ProteinID:
XP_011172919
LinkDB
All DBs
Position
3:17795303..17917151
Genome browser
AA seq
1107 aa
AA seq
DB search
MQVATLFRESATLLGASSLDPPQTHHHQGMHQPQPQQQQQQQHQQMQQQQQHASDMHLVG
HHMQHHYKMYPSPVQNGGPNGTTTMTCASSQGVMVKQEARDDGYETSPDLEMRSTGGDSS
QQYHTPLTPHTPHTPHTPHTPLTPISATAHQPQQPGSTASALGQVAIKCETPVDPYSFVD
EEMSMGGIRTASSPGGGGGGGGGGGGGNPESMTCPGGAQPGLGTPTSTPPGALPGPQHHQ
MNLVMNGAASVNPQLAHQPKKRGRKKKSEMILTPEEAELAEAKKRAKTYKERKKHDRFDG
MPEEEVSKRVLPDHLTNNLDIIIIGINPGLFAAYKGHHYAGPGNHFWKCLHLSGLTPEPL
TADDDYKLLRLGIGFTNMVARATKGSADLTRKEIKEGSHILLEKLRKYKPKIAVFNGKLI
YEVFSGKKEFGFGRQPNLVDGTNTYMWVMPSSSARCAQLPRAADKVPYYAALKKFRDYLN
GTITHLDESDIVFADSKLKKKEHEPIEDKKPVFADDLPDGDGRITEINGMGIKQETGVIP
GKKKRGRPKKIKNPEDQPQPDPEKLDANGEVIKKRRGRPKKIHQQQKQMERDNREREQQQ
QQHQHQAMGHLNDGYGNVPNCFSPPIMSPPKTFPHMAPYPQPMNDGFFGPGMNDNSPYNM
SAKQSPVHLQHYSQSPKSMSLSFHSDLSSEINTAISSENNLEPSPLTSPSVEHPDFEPPT
SMSQQSMGNDHRQYNPAGGPDTTGHHGSPGTPSHNSYANYMGYHEQPPDAHNPHPHQTTP
TPLSQTAEEHSHHSHPTPPHPHTPTHTSMSPHNPHEQYGIKRNSGQDVASKSLSDLESLV
DQIPSIADGGSQRLQHSHPGMSGDDSLAEKLDAHHQSYMSGFGGMSAGPGGMTNYSPPLP
PGGGIYPSPLHHSPTDAGYGGLYGMNTRHHQESQQQQQQQHQQQQQQQQQQQQQQQQHSK
SYTVENLASSNYTPSMNHGHPGNSYPNIIPGHYPVPMGSTNGYLFGGLESSLMQRTYGIG
GMSGMSSMHPSAAIGHPMTANPYPYNGSYSSSFDAYPTPPTSIHAPSANYPGYVTTAGAA
PSSTTSPPSYLAPSHHRPPVDLSYDGV
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtggcaacgttgttcagggagagcgctaccctgctgggtgcatctagcctggac
cccccgcagactcaccatcatcagggtatgcatcagccgcagccgcagcaacagcagcag
cagcagcatcagcagatgcagcagcagcagcaacacgccagcgacatgcacctagtcggc
caccacatgcagcaccactacaagatgtatccgtcaccggtgcagaacggaggaccaaat
ggcacgacgacaatgacttgcgcgagttctcaaggggtgatggtgaagcaggaggcgagg
gacgacggttacgagacgagtccggacctcgagatgaggagcaccggcggtgacagcagt
cagcagtatcacacgccgctgacaccacacacgccgcacacaccgcacacgccgcacacg
cccctcacgccgatatcggcgacagcgcatcaaccccagcagccgggctcgaccgcctcc
gccctcggacaggtcgcgataaaatgcgagacgccggtggacccgtattcgttcgtcgac
gaggagatgtcgatgggcggcataaggacggcgagcagtccaggcggcggcggcggcggc
ggcggcggcggtggcggcggcaatcccgagagcatgacgtgtccgggcggcgcccaacct
gggctgggtacacccacgtcgacgccgcccggggcgctgcccgggccacaacatcatcag
atgaatctcgtgatgaacggcgccgccagcgtcaatccgcagctggcgcatcagccgaag
aagcgaggccgcaaaaaaaagtcggagatgatactcacccccgaggaagcggaactcgcg
gaggccaagaaacgcgcaaagacgtacaaagagaggaagaagcacgacaggttcgacggt
atgccggaagaggaagtgagcaagcgcgttctaccggaccacctcaccaacaaccttgac
attattataattggtatcaaccccggactattcgcggcttacaagggacatcattacgct
ggacctggaaatcatttttggaaatgcctacatctaagtggtctcacgcccgaaccattg
actgcggacgacgattacaagctcttacgacttggtatcggttttacaaatatggtagca
cgtgcgacgaaaggcagcgcagatcttacaagaaaggaaattaaagaaggtagtcacatt
ctgctcgagaaattacgaaagtataagccaaaaattgcagtattcaacggcaaactcata
tacgaagtattctcgggaaagaaggaatttggattcggaagacagcccaatctcgtcgac
ggtacaaacacgtatatgtgggttatgccctcgagcagcgcgaggtgtgcgcaattgcca
cgtgctgctgacaaggtgccatattacgctgctctgaagaagttccgtgactacctgaac
ggtacgatcacgcatttggacgagtcagacatcgttttcgccgattcgaagctcaagaaa
aaggaacacgagccgatcgaggacaagaagccagtgtttgccgacgatttgcccgacggt
gacggccgaatcacggagatcaacggcatgggaattaagcaggagacgggcgtgataccc
ggcaagaaaaaacgcggcagaccgaagaagatcaagaatccggaggatcaaccgcagcca
gatcccgagaagctggacgcgaacggcgaggtcattaagaagcgccgcggtcgtccgaaa
aagatccatcaacagcagaagcaaatggagcgggacaatcgcgagagagagcaacagcag
cagcagcatcagcaccaggcgatgggccatttgaacgatggttacggtaacgtgccgaat
tgcttctcaccaccgataatgtcaccgccgaagacgttcccgcacatggcgccgtatccg
caaccgatgaacgatggattttttggtccgggcatgaacgacaatagcccgtacaacatg
agcgcgaagcaaagcccggtgcacctgcaacactacagccagagtcccaagtccatgtcg
ctgtcgtttcactcggatctgtcgtcggagatcaataccgcgatctcgtcggagaacaat
ctcgagccgtcgcccttgacgtcgcccagtgttgagcatccggactttgagcctcccacc
agcatgtcgcagcagagcatgggcaatgaccatcgtcagtacaatccggccggagggccc
gacacgacgggccaccatggcagccctggcacgccgtcccacaacagctacgccaactac
atgggctaccacgaacagccgccggacgcgcataatccgcatccacatcagacgacaccg
acgcctcttagccagacggccgaggagcactcccatcattcgcatccaacgccgccgcat
ccgcatacgcccacccacacgtccatgtcaccgcacaatccgcacgagcagtacggcatc
aagaggaactccggccaggacgtggcgtccaagagcctgagcgacttggaatcactagtg
gaccagatcccgagtatagccgacggcggtagtcagcgtctccagcattcgcatccgggt
atgtcgggcgacgatagcctcgcggagaagttggacgcccaccatcagtcctacatgtct
ggtttcggcggcatgtcggctggaccaggtgggatgaccaattacagtccaccattgcca
cccggtggcggaatctatccctccccgctgcaccactctcccactgacgcaggctacgga
ggtttatacggtatgaacacccgccatcatcaggagtctcagcaacagcaacagcagcag
catcaacagcagcagcagcagcagcaacaacagcagcaacaacagcagcagcacagcaag
tcctacacggtggagaatcttgcgtccagtaactacaccccaagcatgaatcacggccac
cctggtaactcttatcctaacatcatacccggtcattatccggtgccgatgggctcgacc
aacggctatctgttcggtggcctcgaatccagcctgatgcaacgtacctacggaatcggc
gggatgagcggcatgagtagcatgcacccatccgccgccatcggccatccgatgacggcc
aatccgtatccgtacaacggctcgtactcaagctcgtttgatgcttacccgacgccaccg
acgagcatacacgcgcccagcgccaattaccccggctacgtcaccacggctggcgcggcg
cccagcagcaccacctcgccgccgtcctacctcgcaccgtcgcatcacagaccgccggtc
gacctctcctacgacggtgtatga
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