Sodalis praecaptivus: Sant_3260
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Entry
Sant_3260 CDS
T03004
Name
(GenBank) Radical SAM domain-containing protein
KO
K10026
7-carboxy-7-deazaguanine synthase [EC:
4.3.99.3
]
Organism
sod
Sodalis praecaptivus
Pathway
sod00790
Folate biosynthesis
sod01100
Metabolic pathways
Module
sod_M00988
PreQ1 biosynthesis, GTP => 7-Aminomethyl-7-deazaguanine
Brite
KEGG Orthology (KO) [BR:
sod00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00790 Folate biosynthesis
Sant_3260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sod03016
]
Sant_3260
Enzymes [BR:
sod01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.99 Other carbon-nitrogen lyases
4.3.99.3 7-carboxy-7-deazaguanine synthase
Sant_3260
Transfer RNA biogenesis [BR:
sod03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
Sant_3260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
DUF5631
Motif
Other DBs
NCBI-ProteinID:
AHF78252
UniProt:
W0I0C5
LinkDB
All DBs
Position
complement(3720348..3721019)
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AA seq
223 aa
AA seq
DB search
MQYPLNEIFQTLQGEGYFTGVPAIFIRLQGCPVGCSWCDTKHTWQQDETDHVPAGEIPLK
TADSSRWASLTAEEMIAMIAQQGWTARHVVITGGEPCLHDLMPLTHALEQQGYSCQIETS
GTQEVHCTPQTWVTVSPKINMRGGLPVLAQALGRSDEIKHPVARQRDIDELDALLQTLHD
TKQRVIALQPISQKEAATRLCIETCIARNWRLSMQTHKYLNIA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacccgcttaacgaaattttccagaccctccagggcgaaggctattttaccggc
gtgccggcgatctttattcgtctgcaggggtgtccggtgggatgcagctggtgcgatacc
aaacatacctggcaacaggacgagaccgatcatgtgccggcgggggaaataccgctgaag
accgccgacagcagccgctgggccagcctcacggcggaggagatgatcgcgatgatcgcg
cagcagggctggaccgcccggcacgtcgtgataaccggcggcgagccctgtttgcatgat
ttgatgcccctgacccacgccctggaacagcagggttacagctgccagattgaaaccagc
ggtacccaggaggttcactgcacgccgcaaacctgggtgacggtgtcgccgaaaatcaat
atgcgcggtggtttgccggtgctggcacaggcgctgggccgcagcgatgaaatcaagcat
ccggtggcgcgacagcgcgatatcgacgagttggatgcgctgttgcagaccctgcatgat
acaaaacagcgggttatcgcgctccagcccatcagtcagaaagaggcggccacccgcttg
tgtatcgagacctgcatcgcccgtaactggcggttatcgatgcaaacccacaagtacctc
aacatcgcctaa
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