Spinacia oleracea (spinach): 110783466
Help
Entry
110783466 CDS
T05137
Name
(RefSeq) ubiquitin receptor RAD23c-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03420
Nucleotide excision repair
soe04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
110783466
09124 Replication and repair
03420 Nucleotide excision repair
110783466
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
soe03051
]
110783466
03400 DNA repair and recombination proteins [BR:
soe03400
]
110783466
Proteasome [BR:
soe03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
110783466
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
110783466
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
Dsc3_N
Rad60-SLD_2
Ubiquitin_2
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
110783466
NCBI-ProteinID:
XP_021843497
UniProt:
A0A9R0I6N4
LinkDB
All DBs
Position
3:99600782..99615142
Genome browser
AA seq
490 aa
AA seq
DB search
MKVFVKNLKGTYFQIEVNPQQTIADVKKNIEYVQGENEFPASQQMLIYQGKVLTDTTTLE
ENKVGEKSFIVVTLIKSKSSSGRSSAATAGVAVPTSKAPATPVSPSTEASATPPTNVPDV
AFPASAPTSTPDPIVSSSVPESDDGGQVAKNLVAGKDIEHTIQHILDIGGGIWDRDTVVD
ALRVASNNPERAVQYLKSSKSSPGESSVAAAAATPTSEASSSPESSSVEASATPPITVAG
ASLPASTPTSVPGPIISSSLPESDVDGHVASNLVARNNYENTIQHILDMGGGVWNRETVM
RALHAASNNPEIAVAYLYSGIPEQAKGPSSAQSLGQPKLVPANGPSAGPQNIFARGLRSV
GSDAAPAGSLDFLRNSEQFQALRAMVQANPQVLQPMLQEFGKQNPNLMRLIQEHQTEFNQ
LLNEPVEENILEQVAAATPQALQVTPTEHAAIERLEAMGFDRSSVLEVYFACNKNEELTA
NYLLDHIHEL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttcgtgaagaatttgaaagggacctattttcaaattgaagttaacccacaa
caaacgatagctgatgtgaagaaaaacattgaatatgtacaaggagaaaatgagtttcct
gcatcacagcagatgcttatttatcaaggaaaagttcttacagatacaactacactggaa
gaaaacaaagttggtgaaaagagttttatagtcgtcacgctgattaagagtaagagctca
tctgggagaagttcagcagcaacggcaggagtagctgtgcctacaagcaaagctcctgct
acacctgtgtctccttctactgaagcatctgctacacctccaactaatgtgcctgatgta
gctttccctgcatctgcacctacatcgacgccggatcccattgtctcatcttctgtgcca
gaatctgatgacggtggacaggtagctaaaaatcttgttgctggaaaggacattgagcat
acaatacagcacatacttgatataggtggaggaatttgggacagagacactgttgtggat
gcccttcgtgttgcatctaataacccagagagagctgttcagtatctaaaatctagtaag
agttcccctggggagagttcagtggcagcagcagcagctacacctacatctgaggcttct
tcaagccctgagtcttcttctgttgaggcatctgctacacctcctataactgtggcaggt
gcatctctccctgcatctacacctacttccgttccaggtcccattatttcatcttctctg
ccagaatctgatgttgatggccacgtagcttcaaatctcgttgctagaaataactatgaa
aatacaatccagcacatacttgatatgggcggaggagtttggaacagagagactgttatg
cgtgcccttcatgctgcatccaataacccagagatagctgttgcatacctttattctggt
attcctgagcaagctaaagggccctcttctgctcaatcccttggacaaccaaagttagta
ccagccaatggacctagtgctggtcctcaaaatatttttgctcggggccttcgcagtgtg
ggttctgatgcggctcccgctggttccttggattttctgcgtaacagcgaacagttccaa
gctttgcgagccatggttcaagctaatccgcaggttttgcagcccatgcttcaagagttt
ggcaaacaaaatccaaatttgatgaggcttattcaagaacatcagactgaattcaaccaa
ttgttaaatgaacctgtcgaagagaacatacttgaacaagttgctgctgcaacgcctcag
gccttacaagttactcccactgagcatgctgccatagaacggcttgaagctatgggtttc
gaccggtcaagtgtactagaggtgtactttgcctgcaacaaaaatgaggagcttacagct
aactaccttctagatcatatacatgagctttga
DBGET
integrated database retrieval system