Spinacia oleracea (spinach): 110786517
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Entry
110786517 CDS
T05137
Name
(RefSeq) uncharacterized protein LOC110786517 isoform X2
KO
K14311
nuclear pore complex protein Nup188
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110786517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
110786517
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
110786517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
110786517
NCBI-ProteinID:
XP_021846762
UniProt:
A0A9R0ICD6
LinkDB
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Position
4:174289995..174319975
Genome browser
AA seq
1986 aa
AA seq
DB search
MAASIAAATATKSVDASLWFDSFSLLLTDLENLSPSSSDLPPSLAEKLKQNHAWFLNTVT
QFKPPSEASKGALNSEQVNVGSHKLSIKPQLRDLAFKLSSTVCLDEIQSYILVERSMDQK
ADLVDGAIQGFLHEIVLQYYTQRLCLLKCARQMIIHGLNVGSAVEEGYAILHEVSELISD
GLEGKLISILDRQLSVSFPQHMDVDLFILWAEAILIEDNLILDILFLVYYESFSTCGASK
WKALCLLYKDMTAGSSNFVKLGVSAEACKYCYRAKIQMLLILIETLDFESLLQMIHDEIP
FRDSSCVFSSSDILEMDSVISSFDIYETKEVGPLILSWAVFLCLIVSLPGKDEHNDLTEV
DHVGYVRQAFESASLSIFMDILRSDVLKDSDGPLAGYRSILRTFVAAFIASYEINTQLGD
DTFRLILTILCEIYRGEESLCVQFWDKGSIVDGPVRCLLCNLEAEFPYRTIELTRFLAAL
SEGWWPAECVYNFMEKSVGISSVLEIHSDLLVGGASQMIETQYPLHVPTVEGLLIPSKTH
GRILRMIDSKTALVRWEYKQSGMVVLLLRLAQMLELDGNEEVLVVLDLFSRVVSFNMDVC
FSMMNIGKSLHLQTNFGDEHMEGGIWIDMVEVLCNIVKNLSPYSGSVLAMSMNVNILAKM
MKCWPTHVSAVVLKMNIFDLSLTSSIFGNRGNGLSSGSWLLSGRLAKMLLIDCEHNVGCP
LTISVLEFTMQLLGAGVENEFSHALVMFCLQYVFGNHEYWKYKVKQDRWNVTLKVLGVLK
ICIISIPYLKKLGGNIRDIILSDSSIHSMILRIICTTSPALEKLNVSRLYDWKEIDGLQH
AICSMLDILVNILSKFLEDDFSGLPVFYQALLSNSTKPIPVAEALASLISYFRNPAIQVG
ATAALSMLCRTADHSQPYLSGNANFSLGGKQVMQLRYAIESIIREQPEKNEPLFVAVIEL
LTSAATHQPAFLAAVFSGEEIRPDHSRNNGDLNENGRDSTSQALKSDNAMHLVEMLVLYV
EKSDTLIERNARVLLSILNLMKALWQGAAQYTDILKAIRKSKKFWKQLSESVMLISRTEA
PSPINLPETEAQKCSYEYQCQSAALDIMALEIFLQQKLLHAKFLIRQTDQSLKGKVGGIG
TSAQVSAESEHLEDILLSWSDSAGLSVLLKSTATCMYNTDIYLQAKIAFGLLASHIIAKL
ATGDAGSMSLSFIEEVTTLSTKLFNLPAYSELCTQYSQHGYSEGIHIKNLILNDLYYHIQ
GELEGRNIEHGPFKELSQFLSGSDLLQAYQKKSVNDFSAGGNNAYLFDILRLQDDIGLEI
WDHSEWKASKKIVDTTLLYLQRANSMLLILGSRLQALRALITIITLNMGDKVDRQKSMLK
RISRDKLLSCVDHECKELQVTLGLLTAASDAPPQEVLNYVAAQTELLLCLVRHVDSGMPS
PACLVILNTCGFGIKKLRESRLFGAEVKLIIRSLLMLIHLVVDLSSRSTFSFSTNDSESE
VSSEVVNSCLGILPILCSCTEIPDQSISLVAIDLVIKRLLSPTTWLPIIQQHLHLQQLIF
KLRDQSCFESLPVIMKFLLTLASVRGGAEMIVASGFLTSLRVLFSELSNGCVGNWVKPEK
STTLVTEFEKPQFIWGLGLAVLTETICSLGETTLRNEVVDTMISYFFSEKANLIAYHLSA
PGLPSDDHDKKRLRAQKKKTSLSAFRETKHTLMLLCILAKRRNSWVKATKEMGSELRGNI
IHLLAFISRRSHRLGESSARPAPLLCAPISKEENDYCKKPSFVNSRNGWFMAAALGCVPV
ASISDEYSQTAIMVKDQPNGNVETGRSTHFSDTVAVQIYEVTFLILKFLLLQAKDAAARA
EELGFIDLSHFPELPDPEILHCLQDQTIAIVTEVCETDKSKQIQPNTQAVCLLLLKIVEM
ALYLEHCVSQICGIRPVMGRVEDFSKQMRFLVRATEGQTFLKSSMKHLKQIVSFVYPGLL
QNEGIL
NT seq
5961 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccatcgccgccgctaccgcaaccaagtctgtcgacgcttctctctggttc
gactctttctctctcctcctcactgacctcgagaatctctctccttcctcctccgacctc
cctccttctctggcggagaagttgaagcaaaatcatgcctggttcttgaataccgtcaca
cagtttaaaccgccgagtgaggcgtcgaaaggggctttgaattctgaacaagtcaatgtt
ggttcgcataaattgagtattaagcctcaattgagggatttagctttcaagcttagctcc
actgtgtgcttagatgagatacaatcatacattcttgtcgaaaggtcgatggatcagaaa
gctgatttagttgatggagccattcaaggttttcttcacgagatagtgctgcaatattat
actcaaaggctatgcttactgaaatgtgctcgccagatgatcattcatggattgaatgtt
ggatcagctgttgaagaaggttatgccattttgcatgaggtgtctgagctcatttccgat
ggcctagagggaaagttgatatctattctagacagacaattgtcagtatcttttcctcag
cacatggatgttgatcttttcattttatgggctgaagcgattctgattgaagacaacttg
attttggacattctatttcttgtatattatgagtcgttctctacgtgcggtgcttctaaa
tggaaggcgctatgcctgctgtataaggacatgacagcaggatcttcaaactttgttaag
ctgggggtgtctgctgaagcttgtaaatattgttatcgtgctaagattcagatgctattg
atccttatcgagaccttagactttgagagtcttcttcaaatgatacatgatgaaatcccc
tttagggacagctcttgtgtgttttcatcaagtgatatcctagagatggattctgtaatc
tccagttttgatatttacgagaccaaagaagtgggccctctgatcctttcctgggctgtt
tttctttgcctgattgtatctcttcctggaaaagacgaacataatgatctaacggaagtt
gaccacgttggatatgttcgtcaagcctttgagtctgcttcattgagcatttttatggat
attcttcgaagtgatgtgttgaaggattcagatggacctcttgctggataccggagcata
ttgaggacatttgttgctgcatttattgcatcttatgaaattaatacccagctgggagat
gatacgttcagactgatattaactattctatgtgagatataccgaggagaggagtcactc
tgtgtacaattctgggacaagggaagtatagttgatggtcctgttcgttgtcttctttgc
aatttggaggctgaatttccatacagaactatcgagctgacacgctttttagcagcactc
tctgaggggtggtggcctgcagagtgtgtgtacaattttatggagaaatctgttggaata
tcatctgtgcttgagattcatagtgacttattggttggcggagcatctcagatgattgag
actcaatatccattgcatgttccaactgttgaaggtttacttattccaagtaaaacacat
ggtcgtattttgagaatgattgattccaaaactgctcttgtgcgctgggagtacaagcag
tctgggatggttgtcctgcttctgcgtttagcccagatgctggagttggatggaaatgaa
gaggtccttgtggtccttgatcttttcagtcgagttgtatccttcaacatggatgtttgt
ttctctatgatgaatattggcaagtctcttcatcttcaaacaaactttggtgatgagcat
atggagggtggtatttggattgacatggttgaggtcttgtgcaacatcgtcaagaaccta
tcaccttatagtggcagtgttttagccatgtccatgaatgtcaatattttggcaaagatg
atgaagtgttggccgactcatgttagtgctgtagttttgaagatgaacatatttgatctg
tcgctaacgtctagtatattcggtaaccggggcaatggtttatcaagtggttcatggtta
ctttctggaagacttgcgaaaatgcttttgattgattgtgagcacaacgttggctgtccc
ttgactatttcagttctggaattcaccatgcagcttcttggagctggggtagaaaatgag
ttttcccatgctcttgtcatgttttgtcttcagtatgtctttggtaatcacgagtactgg
aaatataaggtgaaacaagaccgatggaacgtcacgttgaaagtgcttggagtactgaag
atatgcataatatctatcccttaccttaaaaagcttggtggaaatatcagagatattatc
ctttctgattcttctatccatagcatgatacttcgaattatttgtacaacatcaccagca
ttagagaaactcaacgtcagcagactttatgattggaaagagattgatggtttgcagcat
gcaatatgttccatgttggatattctagtgaacattctctccaaattcctagaggatgat
ttctctgggttgccagtattctatcaagcattgctgtcaaactctactaagccgattcct
gttgctgaggccctggcatccttaatctcgtatttccgaaatcctgctatacaagtggga
gctactgcagcactttcaatgttgtgccgaactgctgatcattcacagccttatttatct
gggaatgcaaacttcagtctgggcggtaaacaggttatgcaactaagatatgccattgaa
agtattatccgtgaacaacctgaaaagaatgaacccctctttgtagctgttattgagcta
cttacttctgcagcgactcaccagcctgcttttcttgctgctgttttttctggtgaagag
attagacctgaccattcaaggaataatggtgatttaaatgaaaacggaagggattccact
tcccaggctttgaagtctgacaatgcaatgcatctagtggaaatgcttgtgctttatgtt
gaaaaatctgatacacttattgaaaggaatgccagagttcttttgagtatactgaatctt
atgaaagcactgtggcaaggagctgcacaatatactgatattctgaaggccattagaaag
tctaagaagttttggaaacagttgtctgaatctgtaatgctcatcagccgtacggaagct
ccctcgccaataaatcttcctgaaaccgaggcacaaaagtgttcgtatgagtatcaatgc
cagtctgctgcattagatattatggctttagaaatatttctgcagcagaagttattgcat
gccaagtttctgataagacaaactgatcaatccttgaaaggaaaagttggaggtattggg
accagtgcacaagtgtccgcagaatcagaacaccttgaagatatcctgttatcttggtct
gatagcgctggtttgagcgtccttctaaaatcaactgcaacttgcatgtataatactgat
atttatcttcaagcaaagattgcttttggtttgcttgcttcacacataattgcgaagttg
gccacaggtgatgctggcagcatgtctttatctttcatagaagaagttaccacactgtct
acaaagttgttcaatctacctgcatattctgagttgtgcacccaatattcacagcatggt
tacagtgaaggaatacacataaagaacttgatactcaatgatctctattatcatatacaa
ggagagttggaaggacgcaacatcgagcatggcccattcaaagagctttcccagttctta
tctggctcagatcttctgcaagcttatcagaagaagagtgttaatgatttctcagcagga
ggcaacaatgcttacttgtttgatattttgcgccttcaagatgacattggccttgaaatt
tgggatcactcggaatggaaagcatcaaaaaagattgtggacactacattactgtacctg
cagcgtgccaactctatgttgttgatccttggttcaagactccaagcgttgcgagctctt
atcacaattataactctcaatatgggggataaagtggacagacagaaaagtatgttgaag
agaatctcaagggacaaacttctttcatgcgtagaccatgaatgcaaggagttacaagtg
acattgggattacttacagcagcttcagatgctccgcctcaggaagttcttaactatgtc
gctgcacagacagaattgcttctatgtcttgttaggcatgttgacagtggcatgccttca
cctgcttgtttggtcatattgaacacttgcggtttcggcattaaaaagttgcgtgagtct
aggctgtttggtgctgaggttaaactaataataaggtccctattgatgctgattcatttg
gtggtggatctcagctctcgcagtaccttttctttcagcacaaatgacagtgaatctgaa
gtctctagtgaagtggttaatagttgtttgggcatattgccaatactttgcagctgtact
gaaattcctgatcaatctatttcccttgttgccattgaccttgtaatcaagaggttatta
tcacccaccacatggctccccatcatccagcaacatcttcatttgcagcaactcattttc
aagcttcgtgatcagagttgttttgaatctcttccagtaataatgaagtttcttttgacc
cttgctagtgtcagaggaggtgctgagatgattgttgcctctgggttcttgacatctctg
agagttttgttttcggaattatcgaatggctgtgtgggtaactgggttaaaccagagaaa
tccacaacactggtaaccgagtttgaaaagccacagttcatctggggattaggtttggct
gtccttacagaaacaatttgttctttaggagaaactacacttcgtaacgaagtggtagat
accatgatatcttacttcttctctgagaaagcaaatctaatagcgtatcatcttagtgca
cccggcttaccgtctgatgaccatgataagaaacggttaagggctcagaagaagaagacc
tctttgtctgcgtttagggagacgaagcatactcttatgctgctatgcatccttgccaag
cgcagaaactcgtgggtaaaagccaccaaagaaatgggttctgagcttcggggaaatata
atccatcttttagctttcattagtaggagaagtcaccgtcttggagagtcatctgctcgg
cctgcgcctcttttatgtgctccaatttccaaagaggaaaacgattattgcaaaaaacca
tcatttgtaaatagcagaaatggatggtttatggctgctgctcttgggtgtgtaccagtt
gccagtatttctgatgaatattcacagactgctatcatggtcaaggaccaaccaaatgga
aatgtggagacaggaagatctacacacttttcagatactgttgctgtacagatatatgaa
gtcacatttctcatcctgaaatttttactcctacaagctaaagatgctgctgcacgggct
gaagaattgggtttcatcgatctttcccatttcccagagcttcctgatccagaaatatta
cactgcttgcaggaccagacaattgctattgttactgaagtttgcgaaaccgataaatcc
aaacagatacaacctaatacccaagctgtctgccttttgttgcttaagatagtggaaatg
gctttgtatttggaacattgcgtctctcaaatctgcggaattagacctgtgatgggacgt
gttgaagatttctctaaacaaatgaggtttttagtcagagctaccgagggacaaacgttt
ttgaagtcttcaatgaagcatttgaagcaaattgtatcattcgtatatccaggtttgtta
caaaatgaaggcattttgtag
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