Spinacia oleracea (spinach): 110788606
Help
Entry
110788606 CDS
T05137
Name
(RefSeq) DNA mismatch repair protein PMS1
KO
K10858
DNA mismatch repair protein PMS2
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110788606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
soe03400
]
110788606
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110788606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110788606
NCBI-ProteinID:
XP_021848920
UniProt:
A0A9R0JVR7
LinkDB
All DBs
Position
6:complement(124011527..124028580)
Genome browser
AA seq
917 aa
AA seq
DB search
MSEIARGAPETANSPMIKPINKHVVHKICAGQVILDLSSAIKELVENSLDAGATSIEIAL
KDYGEEWFQVIDNGCGISPNNFKVLALKHHTSKLAEFPDLQSLTTFGFRGEALSSLCALG
SLTVETRTKNELVATLLTFDNTGQLVAEHKTARKVGTSVTVKKLFSNLPVRSKEFSRNIR
KEYGKLISLLNAYAIIAKGVRFVCTNMSGKNARSVVLKTQGSGSLKDNIITLFGLTTFTC
LEPLSIPMSDNCRVEGFVSKSGYGSGRNMGDRQFFYVNGRPVDMPKVSKLVNELYRGANS
RQYPIAILDFIVPVMAYDVNVTPDKRKIFFSDERSILQYLREALGMIYSASSVTYSVMNI
DVPDEKDDHSSPRPVGLQLASEQYKPSPKRAQAEKVCDEKQANRDNRMSDSIGKDNHLSS
FGLQNDAQKSRDRDFGLRVHSIKKAYSNSLGHDNKITSIDFDQQCLKGDERDVARNSNLT
NKSASVQSSLTKFVTMQKRKYENISIPLSEAPILRNEPLQRNKESNDLELHSASASSPTK
VHDSARLYEHQTSKNSNTATDLCQSSSPLLNDGDECMEVSREDIRLQEEGVPPEEVTIPS
GSRGEISESELEEESLGTQPLQGTPHPSSAPKASSTLQFGIRDLMKRRKQKLSISRSSVD
DSTRITTKRCYAAATLELSQMDNEEWKARALAAATTELERLFRKRDFSRMKVIGQFNLGF
IIGKLDEDLFIVDQHAADEKYNFERLSESTVMNQQPLLRPISLELSPEEEIVASMHMDMI
RKNGFILEEDLDASPGNRFKLKSVPFSKNVTFGAEDVKELISTLSDGQGECSIMSTYRMD
TADSICPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAELKSPWNCPHGRPTMRHL
VNLSVIREREISEITSL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaattgcaagaggagcaccggaaacggctaattcgccgatgatcaagcccata
aacaagcacgtagtccacaaaatttgcgcggggcaagtaattttggacctttcctctgcc
atcaaagagcttgttgagaatagcttggatgccggcgctacgagtatcgaaatcgctctc
aaggattacggagaagagtggttccaagtcatcgataatggttgcggcatttccccaaat
aatttcaaggttcttgctcttaagcatcatacttcgaaattggcagaatttcctgacctt
cagtctctcaccacatttggcttcagaggagaggcattgagttccctttgtgcacttggg
agtttgacagtggaaactaggacaaaaaacgagttagttgctacactcttgacatttgac
aacactggccaattagtagctgaacataagactgcacgaaaagttggtacttcagtaact
gtcaagaaattgttctcaaatttacctgtgcgtagcaaggagttcagtcgtaatattcgt
aaggagtatgggaaacttatatctttgttgaatgcctatgcaatcattgcaaaaggagtt
cgatttgtctgcaccaatatgtcggggaaaaatgcaagatccgtggtccttaaaacccaa
ggaagtggatcacttaaagataacatcataacactgtttggcttgactacatttacttgt
ttggagcctctcagtatccctatgtcagataactgcagagttgagggttttgtctctaaa
tcaggttatggcagtggacgaaatatgggtgacaggcagttcttttatgtaaatggccgg
cctgttgatatgccaaaagtaagtaaacttgtgaatgagttatatagaggtgctaactca
cgacagtatcccatcgcgattctggacttcattgttccggttatggcttatgatgtaaat
gtgacaccagataagaggaagatctttttttcggatgaacgctctattctacagtatctg
agagaagctttggggatgatttattcagccagttctgtcacttatagtgttatgaatata
gatgtacccgatgaaaaagatgatcactcatctccacgccctgtgggattacagctggcc
tctgaacagtataagccatctcctaaaagggctcaagctgagaaagtatgtgatgagaag
caagctaatagagataacaggatgtcagattctattggaaaggacaaccatctttcatct
tttggtctccaaaatgatgctcaaaagtcacgggacagggattttggtctcagggtccac
agtataaagaaggcttacagtaattcactgggccatgacaacaaaataacaagtattgat
tttgatcaacaatgccttaaaggggatgaaagggatgttgcaaggaacagtaatttgact
aataagtcagcctctgttcaatcctcacttaccaagtttgttactatgcaaaagcggaag
tatgaaaacatatctatacccttatctgaagcccctatcttaagaaatgaaccacttcaa
cgtaataaggaaagcaatgatttggaattgcattctgcttctgcaagctcacccactaag
gttcatgattctgctaggctttatgagcatcaaacatccaaaaattctaacactgcaaca
gatttgtgtcaatcaagcagccctcttctgaatgacggtgatgaatgcatggaagtgtca
agagaggacattaggcttcaagaggaaggggtgcctcccgaagaagtcaccataccaagt
ggttcaaggggagaaatatctgaaagtgaactagaagaggaatcacttggaacccagcca
ttacaaggtaccccccatccttcgtccgctccaaaggcctcctctactttgcaatttggt
ataagggatctcatgaaaaggaggaagcaaaagttatcaatatcgcgttcgagcgttgat
gatagtactaggatcacaacaaaaaggtgctatgctgctgcgacactagagctttcgcaa
atggacaatgaagagtggaaagctagggctcttgctgctgcaaccacagaactggaaagg
cttttcaggaaaagagacttcagcaggatgaaggtgattgggcaattcaatctgggcttt
attattggaaagctggatgaagacttgtttattgtggatcagcatgcagctgatgagaaa
tataactttgagcgcctctcagaatcaacagtcatgaaccagcagcctttactgcggcca
atcagcttggaattgtctccagaggaggaaatagttgcctcaatgcatatggatatgatt
aggaaaaatggttttatcttggaagaggatctagatgcatcaccaggcaaccgatttaag
ttaaagtctgtcccgttcagtaaaaatgtaacctttggagctgaagatgtaaaagagctc
atttctactctttcggatggtcaaggagaatgctcaattatgagtacgtataggatggat
accgctgactcaatttgcccctccagagtacgcgcaatgctagcatctcgtgcctgcagg
tcgtccattatgattggtgatgcacttggaaggaatgaaatgcagaagatccttgagcac
ttggctgaactgaagtctccatggaactgcccgcatggaagaccaaccatgcgccacttg
gtcaatttgtctgtaatccgcgagagagaaatttcagagattactagtttatga
DBGET
integrated database retrieval system