Spinacia oleracea (spinach): 110806160
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Entry
110806160 CDS
T05137
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5-like
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03022
Basal transcription factors
soe03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110806160
09124 Replication and repair
03420 Nucleotide excision repair
110806160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
110806160
03400 DNA repair and recombination proteins [BR:
soe03400
]
110806160
Transcription machinery [BR:
soe03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110806160
DNA repair and recombination proteins [BR:
soe03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110806160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
110806160
NCBI-ProteinID:
XP_021867483
UniProt:
A0A9R0JI97
LinkDB
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Position
5:complement(28389270..28395183)
Genome browser
AA seq
70 aa
AA seq
DB search
MVNATRGLFISCDIPMAQFIISMNNSKPSNQKFIIHVLDDTHLFVQSHASEMIRIAIAEF
RETNTYEKPP
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatgcgaccagaggactcttcatttcctgcgacatacccatggcgcagttcatc
atcagtatgaacaattccaagccatcgaaccagaaattcataatacatgtccttgatgat
actcacctgtttgtgcagtctcatgcatctgaaatgataaggattgccattgctgaattc
agagagacaaatacttatgaaaaacctccttga
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