Spinacia oleracea (spinach): 130466287
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Entry
130466287 CDS
T05137
Name
(RefSeq) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130466287
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
130466287
03400 DNA repair and recombination proteins [BR:
soe03400
]
130466287
Enzymes [BR:
soe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
130466287
Transcription machinery [BR:
soe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
130466287
DNA repair and recombination proteins [BR:
soe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
130466287
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-GeneID:
130466287
NCBI-ProteinID:
XP_056691107
UniProt:
A0ABM3R664
LinkDB
All DBs
Position
1:19038662..19045398
Genome browser
AA seq
1070 aa
AA seq
DB search
MLRDGNEGMSTIPGFNQIQFEGFWRFIDQGLTEELSKFPKMEDTDQEIEFQLFVETYQLA
EPLIKEKDAVYESLTYSSELYVSAGLIWKTRREMQEQTILIGNIPLMNSLGTFIVNGIYR
IVINQILQSPGIYYRSELDHNGISVYTGTIISDWGGRSELEIDRKARIWARVSRKQKISI
LVLSSAMGSNLREILDNVCYPEIFLSFLNDKEKKKIGSKENAILEFYQQFACVGGDPVFS
ESLCKDLQKKFFQQRCELGRIGRRNMNRRLNLDIPENNTFLLPRDILAAADHLIGMKFGM
GTLDDMNHLKHKRIRSVADLLQDQFGLALVRLENVVRGTISGAIRHKLIPTPQNLVTSTP
LTTTFESFFGLHPLSQVLDRTNPLTQIVHGRKLSYLGPGGLTGRTASFRIRDIHPSHYGR
ICPIDTSEGINVGLIGSLAIHARIGPWGSLESPYYEISERSKRVQMLYLSPSRDEYYMLA
SGNSLALNQGIQEEQVVPARYRQEFLTIAWEQVHFRSIFSFQYFSIGASLIPFIEHNDAN
RALMSSNMQRQAVPLSQSEKCIVGTGLERQVALDSGVLAIAEHEGKIIYTNTDKIVLLGN
GNTVSIPLVMYQRSNKNTCMHQKPQIPRGKCVKKGQILADGAATVGGELALGKNVLVAYM
PWEGYNFEDAVLISERLVYEDIYTSFHIRKYEIQTYVTSQGPEKVTSEIPHLEAHLLRNL
DKNGIVRLGSWVETGDILVGKLTPQMAKESSYAPEDRLLRAILGIQVSTSKETCLKLPIG
GRGRVIDVRWIQKKGGSSYNPETIHVYISQKREIKVGDKVAGRHGNKGIISRILLRQDMP
YLQDGRPVDMIFNPLGVPSRMNVGQIFECSLGLAGSLLDRHYRIAPFDERYEQEASRKLV
FSELYEASKQTANPWVFEPEYPGKSRIFDGRTGDPFEQPVIIGNPYILKLIHQVDDKIHG
RSSGHYALVTQQPLRGRAKQGGQRVGEMEVWALEGFGVAHILQEMLTYKSDHIKARQEVL
GTTIIGGTIPNPEDAPESFRLLVRELRSLALELNHFLVSERNFQINRMEA
NT seq
3213 nt
NT seq
+upstream
nt +downstream
nt
atgctacgggatggaaatgagggaatgtctacaatccctgggtttaatcagatacaattt
gaaggattttggaggttcattgatcagggcttaacggaagaactttctaagtttccaaaa
atggaagatacagaccaagaaattgaatttcaattatttgtggaaacatatcaattagca
gaacccttgataaaagaaaaagatgctgtgtatgaatcacttacatattcttctgaatta
tatgtgtccgcgggattaatttggaaaacccgtagggagatgcaagaacaaacaattttg
attggaaatattcctctaatgaattctctaggaacttttatagtaaatggaatatacaga
attgtgatcaatcaaatattgcaaagcccgggtatttattaccgatccgaattagaccat
aacggaatttcggtctataccggcaccataatatcagattggggaggaagatcagaatta
gagattgatagaaaagcacggatatgggctcgggtgagtaggaaacagaaaatatctatt
ttagttctatcatcagctatgggttcaaatctaagagaaattctggataatgtttgctac
ccggaaattttcttgtctttcctgaatgataaggagaaaaaaaaaattgggtcaaaagaa
aatgccattttggagttttatcaacaatttgcttgtgtgggtggggatccggtattttcg
gaatccttatgtaaggacttgcaaaaaaaattctttcaacaaagatgcgaattaggaagg
attggtcgacgaaatatgaaccggcgactgaaccttgatatacccgaaaataatacgttt
ttgttaccgcgggatatattggcagctgcggatcatttgattggaatgaaatttggaatg
ggtacacttgatgatatgaatcatttgaaacataaacgtattaggtctgtcgcagatctc
ttacaagatcaattcggattggctctagttcgtttagaaaacgtggttcgaggaactata
agtggagcaattcggcataaattaataccgactcctcagaatttggtaacttcaactcca
ttaacaacgacttttgaatctttttttggattacacccattatctcaagttttggatcga
actaatccattgacacaaatagttcatgggagaaaattgagttatttgggtcctggggga
ttgacagggcgaaccgctagttttcggatacgagatatccatcctagtcactacgggcgt
atttgcccaattgacacatctgaaggaatcaatgttgggcttattgggtccttagcaatt
catgcgagaattggtccttgggggtctctagaaagcccttattatgaaatttctgagaga
tcaaaaagggtacagatgctttatttatcgccaagtagggatgaatactatatgttagcg
tccggaaattctttggccctgaatcaaggtattcaggaagaacaggttgttccagctcga
tatcgtcaagaattcctgactattgcgtgggaacaggttcattttcgaagtatcttttcc
ttccaatatttttctattggagcttctctcattccttttatcgagcacaatgatgcaaat
cgagctttaatgagttctaatatgcaacgtcaagcagttccgctttctcagtccgagaag
tgcattgttggaacggggttggaacgccaagtggccctagattcgggggttctcgctata
gccgaacatgagggaaagatcatttataccaacactgacaagattgttttattagggaat
gggaatactgtaagcattccattagttatgtatcaacgttccaacaaaaatacttgtatg
catcaaaaacctcagattccgcgggggaaatgtgttaaaaaggggcaaattttagcagat
ggtgccgctacagttggtggtgagctagctttgggaaaaaacgtattagtagcttatatg
ccgtgggaaggttacaattttgaagatgcggtactcattagtgagcgtcttgtgtatgaa
gatatttatacttcttttcacatacggaaatatgaaattcaaacttatgtgacaagtcaa
ggtcctgaaaaggtcactagcgaaataccacatttagaagctcatttactccgcaattta
gacaaaaatggaattgtgaggttgggatcatgggtagaaacaggtgatattttggtaggt
aaattaacgcctcagatggcaaaagaatcttcgtatgcccctgaagatagattattacga
gctatacttggcattcaggtatccacatcaaaggaaacttgtctaaaactacctataggt
ggtaggggccgagttattgatgtgcgatggatccagaaaaaggggggttccagttataat
ccagaaacgattcatgtatatatttcacaaaaacgtgaaatcaaagtaggcgataaagta
gctggaagacatggaaataagggtatcatttccagaattttgcttagacaagatatgcca
tatttgcaagatggaagacctgttgatatgatctttaacccactaggagtaccttcacga
atgaatgtaggacagatatttgaatgttcgctcgggttagcggggagtctgctagataga
cattatcgaatagcaccttttgatgagagatatgagcaagaggcttcgagaaaactggtg
ttttctgaattatatgaagccagtaagcaaacagcgaatccgtgggtatttgaacccgag
tatccgggaaagagtcgaatatttgatggaagaacgggagatccttttgaacaacccgtt
ataataggaaatccttatatattgaaattaattcatcaagttgatgataaaattcatgga
cgttctagtggacattatgcacttgttacacaacaaccccttcgaggaagagccaagcaa
ggaggacagcgggtaggagaaatggaggtttgggctctagaaggatttggtgttgctcat
attttacaagagatgcttacttataaatcagatcatattaaagctcgccaggaagtactt
ggtactacgatcattgggggaacaatacctaaccctgaagatgctccagaatcttttcga
ctgctcgtccgagaactacgatctttggctctggaactgaatcatttccttgtatctgag
aggaatttccagattaataggatggaagcttaa
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integrated database retrieval system
