Shinella oryzae: K6301_16360
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Entry
K6301_16360 CDS
T08112
Name
(GenBank) IclR family transcriptional regulator
KO
K19333
IclR family transcriptional regulator, KDG regulon repressor
Organism
soj
Shinella oryzae
Brite
KEGG Orthology (KO) [BR:
soj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soj03000
]
K6301_16360
Transcription factors [BR:
soj03000
]
Prokaryotic type
Helix-turn-helix
IclR family
K6301_16360
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
HTH_5
HTH_Crp_2
HTH_24
HTH_23
HTH_20
TrmB
Rrf2
MarR
HTH_47
HTH_17
HTH_29
GAF
HTH_43
Motif
Other DBs
NCBI-ProteinID:
UPA27921
LinkDB
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Position
pZ25:complement(28867..29697)
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AA seq
276 aa
AA seq
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MHSGAAQKRLAGEERYVSAIADTSGNAPEKMLRILDCFTLRSGQLSVGDIADMTGMPRST
THRWVTTLRNAGLLDQDHTGDVYRLGLRLIHLGNSALTNMDISRDARHVLEALSRSTGEK
SHLCVFDGNQMIFVTRTIGGRAGRFNSTTTMESSPCYCTSVGKAVLAFQPTETIERIIQQ
GLHPYTRDTLTDPVRLRDDLATTRKRGYAINNGEMDAHERCIGAPVRNAAGRVIAGLSLS
STRRKLTDDRIPGLAQRVIKHAELLSIQLGYRSRAD
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcattccggtgcggcacaaaagcggctcgcaggggaggaacgatacgtgagcgcgatt
gcagacacatcgggaaatgcacctgagaagatgctccgcatcctcgactgtttcaccctg
cgtagcgggcaattgtcagttggcgacatcgccgacatgacaggcatgccgcgctccacc
acacaccgctgggtcacgaccctgcgcaatgcgggcctgctcgatcaggaccacaccggc
gacgtctaccgcctcggcctgcgccttatccatctcggcaacagcgcgctgacaaacatg
gacatttcgcgcgacgcccgccacgttctggaggcgctgagccgcagcacgggcgagaaa
agccatctctgcgtcttcgacggtaatcagatgatcttcgtgacacgcacgatcggtggc
cgagccggtcgtttcaactcgaccaccacgatggaaagctcaccctgctattgcaccagc
gtgggcaaggccgtgctcgccttccagccaacggaaacgatcgagcgcatcatccaacag
gggcttcacccctatacccgcgacacgctcacggatcccgtcaggctgcgtgacgatctg
gcgaccacccgcaagcgcggatatgcgatcaacaatggcgagatggatgcccatgagcgc
tgcatcggtgcccccgtgcgaaacgccgccggccgagtcattgcgggcctgagcctgagc
agcacgcgtcgcaaactcacggacgatcggataccgggccttgcccagcgtgtcataaaa
cacgccgagcttctctcgatccagctgggatatcgctcccgggcagactag
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