Streptomyces okerensis: ACE1N8_20830
Help
Entry
ACE1N8_20830 CDS
T11145
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
soke Streptomyces okerensis
Pathway
soke03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
soke00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACE1N8_20830 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soke03021
]
ACE1N8_20830 (rpoB)
03400 DNA repair and recombination proteins [BR:
soke03400
]
ACE1N8_20830 (rpoB)
Enzymes [BR:
soke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACE1N8_20830 (rpoB)
Transcription machinery [BR:
soke03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACE1N8_20830 (rpoB)
DNA repair and recombination proteins [BR:
soke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACE1N8_20830 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
XKV06458
LinkDB
All DBs
Position
4593887..4597372
Genome browser
AA seq
1161 aa
AA seq
DB search
MAASRNASTANTNNGASTAPLRISFAKIKEPLEVPNLLALQTESFDWLLGNTAWQSRVEE
ALENGQDVPTKSGLEEIFEEISPIEDFSGSMSLTFRDHRFEPPKNSIDECKERDFTYAAP
LFVTAEFTNNETGEIKSQTVFMGDFPLMTNKGTFVINGTERVVVSQLVRSPGVYFDSSID
KTSDKDIFSAKIIPSRGAWLEMEIDKRDMVGVRIDRKRKQSVTVLLKALGWTTEQILEEF
GEYESMRATLEKDHTQGQDDALLDIYRKLRPGEPPTREAAQTLLENLYFNPKRYDLAKVG
RYKVNKKLGGDEPLDAGVLTTDDVIATIKYLVKLHAGETETVGESGRSIIVETDDIDHFG
NRRIRNVGELIQNQVRTGLARMERVVRERMTTQDVEAITPQTLINIRPVVASIKEFFGTS
QLSQFMDQNNPLSGLTHKRRLNALGPGGLSRERAGFEVRDVHPSHYGRMCPIETPEGPNI
GLIGSLASYGRINPFGFIETPYRKVVEGQVTDDVDYLTADEEDRFVIAQANAPLGDDMRF
VENRILVRRRGGEVDYVPGDEVDYMDVSPRQMVSVATAMIPFLEHDDANRALMGANMMRQ
AVPLIKSESPLVGTGMEYRSAADAGDVVKAEKAGVVQEVSADYITTANDDGTYITYRLAK
FSRSNQGTSVNQKVIVAEGDRLVEGQVLADGPATENGEMALGKNLLVAFMPWEGHNYEDA
IILSQRLVQDDVLSSIHIEEHEVDARDTKLGPEEITRDIPNVSEEVLADLDERGIIRIGA
EVVAGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEIGKVIGVRVFD
REEGDELPPGVNQLVRVYVAQKRKITDGDKLAGRHGNKGVISKILPIEDMPFLEDGTPVD
IILNPLGVPSRMNPGQVLEIHLGWLASRGWDVSGLADEWAERLQAIGADKVEPGTNVATP
VFDGAREDELAGLLQHTIPNRDGERMVLPTGKARLYDGRSGEPFPEPISVGYMYILKLHH
LVDDKLHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWALEAYGAAYALQELLTIKSDD
VTGRVKVYEAIVKGENIPEPGIPESFKVLIKEMQSLCLNVEVLSSDGMSIEMRDTDEDVF
RAAEELGIDLSRREPSSVEEV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
ttggccgcctcgcgcaacgcctcgaccgcgaatacgaacaacggtgccagcaccgccccg
ctgcgcatctcctttgcaaagatcaaggagcctctcgaggttccgaacctgctcgcgctg
cagaccgagagctttgactggctgctcggcaacaccgcctggcagagtcgggtcgaggag
gctctcgagaacgggcaggacgtccccaccaagtccggtctggaggagatcttcgaagag
atctccccgatcgaggacttctccgggtcgatgtcgctgaccttccgcgaccaccgcttc
gagccgccgaagaactccatcgacgagtgcaaggagcgcgacttcacgtacgcggccccg
ctcttcgtcaccgccgagttcaccaacaacgagaccggcgagatcaagtcccagaccgtc
ttcatgggcgacttcccgctcatgacgaacaagggcaccttcgtcatcaacggcaccgag
cgtgtcgtggtgtcccagctggtccgctcgcccggcgtctacttcgactcctccatcgac
aagacgtccgacaaggacatcttctccgccaagatcatcccgtcccggggtgcctggctg
gagatggagatcgacaagcgcgacatggtcggtgtccgcatcgaccgcaagcgcaagcag
tccgtcaccgtcctcctgaaggcgctcggctggaccaccgagcagatcctcgaggagttc
ggcgagtacgagtccatgcgcgccaccctggagaaggaccacacccagggccaggacgac
gcgctgctcgacatctaccgcaagctgcgtccgggcgagccccccacgcgtgaggccgcg
cagacgctgctcgagaacctgtacttcaaccccaagcgctacgacctcgcgaaggtcggc
cgctacaaggtcaacaagaagctcggcggggacgagccgctggacgccggtgtgctcacc
accgacgacgtcatcgccaccatcaagtacctggtgaagctgcacgccggtgagaccgag
acggtcggcgagtccgggcgctcgatcatcgtcgagaccgacgacatcgaccacttcggc
aaccgccgcatccgtaacgtcggcgagctgatccagaaccaggtccgtacgggtctcgcc
cgtatggagcgcgtcgtgcgcgagcgcatgaccacccaggacgtcgaggcgatcacgccg
cagaccctgatcaacatccggccggtcgtcgcctccatcaaggagttcttcggcaccagc
cagctgtcccagttcatggaccagaacaacccgctgtcgggcctgacgcacaagcgtcgt
ctcaacgccctcggcccgggtggtctctcccgtgagcgggccggcttcgaggtccgtgac
gtgcacccctcgcactacggccgcatgtgcccgatcgagacgccggaaggcccgaacatc
ggcctgatcggctcgctcgcctcctacgggcggatcaacccgttcggcttcatcgagacg
ccgtaccgcaaggtcgtcgagggccaggtcaccgacgacgtcgactacctgaccgccgac
gaggaggaccgcttcgtcatcgcgcaggccaacgcgccgctcggcgacgacatgcgcttc
gtcgagaaccgcatcctggtgcgccgccgcggcggcgaggtcgactacgtccccggtgac
gaggtcgactacatggacgtctcgccgcgccagatggtgtcggtcgcgaccgccatgatc
ccgttcctggagcacgacgacgccaaccgtgccctcatgggcgcgaacatgatgcgtcag
gcggtgccgctcatcaagagcgagtccccgctcgtcggcaccggcatggagtaccgctcc
gccgccgacgccggcgacgtggtcaaggccgagaaggcgggtgtggtccaggaggtctcc
gcggactacatcaccaccgccaacgacgacggcacgtacatcacgtaccgcctcgccaag
ttctcccggtccaaccagggcacctcggtcaaccagaaggtcatcgtcgccgagggcgac
cggctcgtcgagggccaggtcctggccgacggtccggccaccgagaacggcgagatggcg
ctcggcaagaacctgctggtcgcgttcatgccgtgggagggccacaactacgaggacgcg
atcatcctgtcgcagcgcctcgtgcaggacgacgtcctctcctcgatccacatcgaggag
cacgaggtcgacgcccgtgacaccaagctcggccccgaggagatcacccgggacatcccg
aacgtctccgaggaggtcctcgccgacctcgacgagcgcggcatcatccgtatcggtgcc
gaggtcgtcgccggcgacatcctcgtcggcaaggtcacgcccaagggtgagaccgagctg
acccccgaggagcgcctgctccgcgcgatcttcggtgagaaggcccgtgaggtccgtgac
acctcgctgaaggtcccgcacggcgagatcggcaaggtcatcggcgtccgcgtcttcgac
cgcgaggagggcgacgagcttccccccggtgtgaaccagctggtgcgcgtctacgtcgcg
cagaagcgcaagatcaccgacggtgacaagctcgccggccggcacggcaacaagggtgtc
atctccaagatcctgcccatcgaggacatgccgttcctcgaggacgggaccccggtcgac
atcatcctcaacccgctgggtgtgccgtcccggatgaacccgggacaggtcctggagatc
cacctcggctggctcgccagccgcggctgggacgtctccggcctcgcggacgagtgggcc
gagcggctccaggccatcggcgccgacaaggtcgagcccggtaccaacgtcgccaccccg
gtcttcgacggtgcgcgcgaggacgagctcgccggtctgctccagcacaccatcccgaac
cgggacggcgagcgcatggtgctcccgaccggcaaggcgcggctgtacgacggccgctcc
ggtgagccgttccccgagccgatctcggtcggttacatgtacatcctgaagctgcaccac
ctggtcgacgacaagctgcacgcgcgttcgaccggtccgtactccatgatcacccagcag
ccgctgggtggtaaggctcagttcggtggacagcggttcggcgagatggaggtgtgggca
ctcgaggcgtacggcgccgcctacgcgctccaggagctgctgaccatcaagtccgacgac
gtcaccggccgcgtgaaggtctacgaggccatcgtcaagggcgagaacatccccgagccc
ggcatccccgagtccttcaaggtcctcatcaaggagatgcagtccctgtgcctgaacgtg
gaggtgctgtccagcgacggcatgtccatcgagatgcgtgacaccgacgaggacgtcttc
cgcgctgcggaggagctcggcatcgacctgtcccggcgcgagccgagcagcgtcgaagag
gtctga
DBGET
integrated database retrieval system
