Schizosaccharomyces osmophilus (fission yeast): SOMG_01891
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Entry
SOMG_01891 CDS
T09274
Symbol
knd1
Name
(RefSeq) Cullin-associated NEDD8-dissociated protein Knd1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
som04121
]
SOMG_01891 (knd1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
som04147
]
SOMG_01891 (knd1)
Ubiquitin system [BR:
som04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
SOMG_01891 (knd1)
Exosome [BR:
som04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SOMG_01891 (knd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_2
HEAT
HEAT_EZ
Cnd1
TOR1L1_N
INTS1_R4
V-ATPase_H_C
RTP1_C1
Motif
Other DBs
NCBI-GeneID:
80875373
NCBI-ProteinID:
XP_056034911
UniProt:
A0AAF0ATR8
LinkDB
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Position
1:complement(join(4142992..4146602,4146658..4146694))
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AA seq
1215 aa
AA seq
DB search
MAEDRLLQKYLQSSDKDLRYMALSDLGNKISSEKRSNIAETFSSQNFIVTLIQALKDPAP
EVQQEAAQCVSSVSIKISDQTLEYLVDQLLIEYSKSYEKNYIAALWMILSQADAQSSLTL
LYHTKIYPRIIDLLETQNTDSEESLSLLSLANDSMELYTSSLSALSTNVASASFQIFQNY
SNNSARVSISKKSINCVCILSIYGPEQCLNTLLHILKEQLMDKPSKSNLHTSVLLLNQLF
ITSANSSSEHSNKFSASAPGYLPVILNLLKDDYDSFDTVQLLLNTLSLLVKSQNSIVENT
CKELISILKEKIQFDPNIVSDVSDEEGMEDFDDEEDFGSMYEDEEDSAWLIRREAISVAS
SLVTFHVELLSVLWEDFGEFIVKALSDREENVKASAIGFLELFCDQISVWKLENSKPKGK
RKFSELSSLSNSTPDEIFAKSLPSLCTYYQKLSKKSPLSVKIGLVNLASHIFRTVPDKLD
NHFVGLMSILDSFQNYKTLELRVKLDVVNLISVIVSSNVKPEFLEKLQPLVTSLLISASQ
DKYLELVFKAIQAEILQCEYYARVAPNVLRDEILQMVNANIELLSSRNLDQRIRISLIKF
ITKTIIYYQGLISSEFLYSLVSLLADKIDEEPTRLQAASALTEIFSKSRSLDLLKENQKT
LLQKILASCVLYAKKADLSLVINSLRLLRVVLSTLPYILAEDKTNELTEFLIHLELLEPE
AIIAKYDCLLEIPIEYLKNYRGTILSGFISFLEHKEIPENSDFIESSVKLAYKILDKEPV
AEFINQLGTFEKSLQESFVIGLIANRLTVLSANTGISQRVFDDLQSPKSEKRRKIFCICF
VASMVFSENNQNIGSYFEALTNQLNSPNEEITQAAALGVGKLATKDEFLVQTLCTLYDSD
TYSRDLLLTSFINVLKIQLKAETAENIWTTVCRYLGDENVAKLHVSECLGLLLLQDSVNL
YPKLLELSEKDTSESKMQALSILRFSLSYQHRKWRSAEKTTFLSVYKLFSDSDVHVREEA
LQLLLTAIRNKPKYIEEIFTDLISALYSKSSVDPNNIRTVQMGPFQHKVDDCLLQRQLVF
EIVYSLLEFPESKNKIDILMQIISMGLEDEQYINLLSISILEKLIDVSSLEVFQRLNLVL
EPLKIILKKQSTEKSLKTDSDNIHDLVRAALRVVISMKAKYNSPEVLALDNETRKGPYAL
EYLNVENELKGLKIV
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggatagactgcttcaaaaatatttacaaagttccgacaaggacttacgctac
atggcattgagtgacttgggaaataaaatcagtagtgaaaagcgttcaaacattgcggaa
acattttccagtcaaaattttatagtcactctaattcaagctttgaaagaccctgctcct
gaggtacaacaagaagctgcacaatgtgtttcatcagtgtctataaaaatttctgatcaa
acattggaatacttagttgatcaactcttaattgagtactcaaaaagctatgaaaagaat
tatatagctgcattgtggatgattctgtctcaagcagatgcacaatccagtttgaccctt
ttgtatcatacaaaaatatatcccagaatcattgatttattagaaactcagaataccgat
tcggaggaatctttaagccttttatcacttgcaaatgactcaatggaactttacacttca
tcgctttcagctttgtcaaccaatgttgcatctgcttctttccagatattccaaaactac
agtaacaattctgcgcgtgtctcaatatcgaagaagtctataaactgtgtgtgcatatta
tccatttatgggcctgaacaatgtttaaatacacttcttcatattttgaaggagcaattg
atggataaaccatccaaatccaatctgcatacatccgttcttttacttaaccaattgttt
attacatcagcaaacagctcttcggaacattcgaataagttttccgcatctgcgccaggt
tatcttccagttatattaaatttattaaaggatgattatgattctttcgacactgtacaa
ttactgctgaatactctatcgcttttggtaaaatctcaaaattctattgttgaaaataca
tgtaaagaattgatcagtattttgaaggaaaagattcaatttgaccccaatatcgtttca
gatgtttcagatgaggaaggtatggaagattttgacgacgaagaagattttggaagtatg
tacgaagatgaagaagacagtgcatggttgattagaagggaggcaatctcagttgcctcc
tcgttagtaacttttcatgtcgaactgctaagtgtcttatgggaggatttcggagaattt
attgttaaagctctgtctgacagagaagaaaatgttaaagcttctgcaatcggatttctc
gagttattttgcgatcaaatatctgtttggaaattagaaaattctaagcctaagggaaaa
aggaaattttcagagctttcatcgctttcgaacagtacacccgatgagatttttgcaaaa
tcacttccttctttatgtacttattatcaaaagttatcaaaaaaatcaccattgtcagtc
aaaattggtttggttaatttagcatctcacattttccggacggtcccagataagctcgat
aaccattttgttggattaatgtcaattttagattcctttcaaaattataaaacattggaa
ttaagagtgaagctcgatgtcgtgaacttaatttctgtgatcgtttcctcgaatgtaaag
cctgaatttctggaaaagcttcaacccttagtaacatctctcctgatttcggcttctcaa
gataaatatctcgaactagtcttcaaagctattcaagcagaaatacttcaatgtgaatac
tacgcacgtgttgctcctaacgttcttcgggatgaaatattgcaaatggtgaacgctaac
atagaacttctttcgtcaaggaacctggatcaacgtatcaggatatcattaatcaaattt
ataacaaaaacaataatttattaccaaggtctcatatcctcggagttcttgtactccctg
gtttcacttttagcagacaaaattgatgaggaacctactcgccttcaagctgcgagtgct
cttactgaaatattttcaaagtccagaagtctcgatctgctaaaagaaaatcaaaaaaca
ttattacaaaagatcctcgcctcttgcgttctatacgcaaagaaagctgatttgtcactt
gttattaatagtttacgtttattgcgagttgtactttcaactttgccttacattctcgca
gaagataagacgaatgaattgactgaattcttaattcacttggaattattagaacctgaa
gctattatcgcaaaatacgattgcctattggagatacccattgaatatttgaagaattat
cgtggcaccatattatcgggtttcatttcatttttagaacataaagagattccggaaaat
tcagatttcattgaatcttctgtgaaactggcatataagattcttgacaaggaaccagtt
gccgaatttattaaccaactaggcacatttgaaaaatcattgcaagaatcttttgtcatc
ggtttaatagcaaatagactcacagtattatctgcaaatactggcatttcgcaaagggta
tttgacgatttgcagagccctaaatcagaaaaacgtcgaaagatattctgtatctgcttt
gttgcttcgatggtgttttccgaaaacaatcagaatataggaagctactttgaagcctta
acgaatcaactaaattcacctaatgaagagataacccaagctgcggcattaggagttgga
aaactggctacgaaagatgaatttttggttcaaacgttatgtacattatatgactcggat
acttattctcgggaccttttgttaacatctttcataaatgttttaaaaattcaattgaaa
gcagagactgccgaaaacatatggactactgtatgtcggtatttaggagatgaaaacgtt
gctaaactgcatgtttcagaatgtttaggattacttttactacaagattctgtcaaccta
taccctaaacttttggagctttcagaaaaagacacatctgagtcaaaaatgcaagcttta
agcattcttcggtttagcctttcttatcaacatcgaaaatggcgtagtgcagagaaaaca
acctttttgagtgtttataaactatttagtgattcggatgttcatgttcgcgaagaagcc
ctgcagctattactgaccgcaatcagaaataagcctaagtatattgaagaaatatttact
gatcttatatctgctttatactctaaatcatctgtggaccctaataatatacgaactgta
caaatgggaccttttcaacataaagttgatgattgtctgctacaaagacaactcgttttt
gaaattgtgtactctttactcgagtttccagagtcgaaaaacaagatagatatattaatg
caaattatttcgatgggacttgaggatgaacagtacattaatttgctttctatctccatt
ttagagaaattgatcgatgtcagttcgttggaagtatttcaacgactaaatcttgtacta
gaaccattgaagattattctgaaaaaacaatcgactgagaaatcgctaaagacggattcg
gataatattcatgatttggttcgtgctgcgctaagagttgtgatctctatgaaagcaaaa
tacaacagtccggaagttttggctttagacaacgagactaggaaaggtccgtatgctcta
gagtacttgaatgtggaaaatgaattgaaaggcctaaagatcgtataa
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