Schizosaccharomyces osmophilus (fission yeast): SOMG_02198
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Entry
SOMG_02198 CDS
T09274
Symbol
pwp1
Name
(RefSeq) WD repeat protein Pwp1
KO
K14791
periodic tryptophan protein 1
Organism
som
Schizosaccharomyces osmophilus (fission yeast)
Brite
KEGG Orthology (KO) [BR:
som00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
som03009
]
SOMG_02198 (pwp1)
Ribosome biogenesis [BR:
som03009
]
Eukaryotic type
90S particles
Other 90S particles
SOMG_02198 (pwp1)
Pre-60S particles
Other pre-60S particles
SOMG_02198 (pwp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_CDC20-Fz
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WD40_RFWD3
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_HPS5
EIF3I
Beta-prop_WDR36-Utp21_2nd
NBCH_WD40
Beta-prop_EML
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_RIG_1st
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF12
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
80875679
NCBI-ProteinID:
XP_056034933
UniProt:
A0AAE9W755
LinkDB
All DBs
Position
1:4837896..4839485
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AA seq
529 aa
AA seq
DB search
MSIISSVAFVPRGFAAEFPKTYELDEAEYERINNISKLKLEDARAQLENPDNEQENNEEA
LTDSEDQTASSGAGVQTAEEVDDELKEYQLDNYDDEEEEEQDDSLSAFSNIKGIQYHENG
ENDPYVTMNTQEEEQVEREEMQIYPTDNLLLAARTEDNMSHVEVYLYESNEENLYVHHDF
LLPSFPLCLEWLDYKVGTSDDTPGNYVAVGTFDTEIEIWNLDVVDAVYPAAVLGASGASS
TSNKKKKKAPKVNPKTHTDAVLALSSNRNAHNLLASGSADSSIKLWDLASCTCVKSFTYH
TDKVSSLSWHPKMPSVLLSGSYDKTVRIADLRADAAPLSITIDSDVENVAWDPHNENNFF
IGSDAGILYYCDARDMSKPVWQLQAHDGPISCLSINPNIPFFVATGSTDRMVKLWNTSDN
APKLAVSRDLDVGRVFTCSFIPDEPVAFHLAASGSKGLVRVWDTATNSGVRRAFDTRVSK
DSVASKERVVQLDDAAANDDSDEEDEYEDIEANDEDDDSADEGEDQDMA
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtccattatttcttcagtagccttcgtccctcgtggattcgctgcagaattccccaaa
acttatgaattggatgaagcagaatatgagaggataaacaatatttccaagttgaagctt
gaagacgctcgtgctcaacttgagaacccagataatgaacaggaaaataacgaagaagca
cttactgactcggaagatcaaactgcttcctcaggtgcaggagttcaaacggcagaggaa
gtagatgatgaactcaaagaataccagttggataattacgacgatgaggaagaggaagag
caagatgatagtttgtcagcatttagcaatattaaaggaattcaataccatgaaaatgga
gagaatgatccttatgtgacaatgaatacacaggaagaagaacaagtggaacgtgaagag
atgcaaatttaccctacagacaaccttttgttggctgcacgtacagaggacaacatgtcc
catgtcgaagtatatttgtatgaatcaaatgaagaaaatctctatgttcatcacgacttt
cttcttccatctttccctttgtgtttagaatggcttgattacaaggttggtacttctgat
gatacacccgggaactacgtggctgtaggaacatttgatactgaaattgagatttggaat
ttagacgtggttgatgcggtttacccagctgctgttttaggtgcaagtggtgcatcctca
acttcaaataaaaagaagaaaaaggctcccaaggtgaaccccaaaacccacaccgatgct
gttcttgctctttcttcgaaccgcaacgctcacaatcttttggcctctggttccgcagac
tctagtattaagctttgggatttggcatcttgtacttgcgtaaaatcctttacttatcac
accgataaagtctcctctttatcctggcatcccaaaatgccctctgttttgctttctggt
agttatgataagacagttagaattgccgatttgcgtgctgacgctgctcctttatcaatt
actattgacagtgatgttgaaaatgtggcatgggatcctcacaatgaaaacaactttttc
attggttctgacgccggtatactgtactactgtgatgctagagacatgagcaaacccgtt
tggcaactacaagcgcacgacggccctatttcttgtttgagcatcaaccccaacattcct
ttctttgtcgctaccggttcgactgatcgaatggtcaaattgtggaatacatctgacaac
gcccctaagttggcggtttctcgtgaccttgacgttggtcgtgtgtttacttgctccttc
attcctgatgaacctgttgccttccatttggctgcttcaggaagtaagggccttgttcgc
gtttgggatactgcaacaaattctggtgtcagaagagcgtttgacactcgtgtcagtaaa
gactctgttgcttccaaggaacgggttgttcaattggacgacgcagctgccaatgatgac
tctgacgaagaagatgaatatgaggatattgaagcaaacgacgaggatgatgattctgcc
gatgaaggtgaagatcaggacatggcttaa
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