Shewanella oneidensis: SO_1526
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Entry
SO_1526 CDS
T00099
Symbol
ispA
Name
(GenBank) geranyl-diphosphate synthase/farnesyl-diphosphate synthase IspA
KO
K00795
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
son
Shewanella oneidensis
Pathway
son00900
Terpenoid backbone biosynthesis
son01100
Metabolic pathways
son01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
son00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SO_1526 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
son01006
]
SO_1526 (ispA)
Enzymes [BR:
son01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
SO_1526 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
SO_1526 (ispA)
Prenyltransferases [BR:
son01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
SO_1526 (ispA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF7227
DUF8038
CdvA
Motif
Other DBs
NCBI-ProteinID:
AAN54587
UniProt:
Q8EGR8
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All DBs
Position
complement(1603076..1603957)
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AA seq
293 aa
AA seq
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MLVNAIKEYQLRVDDQLKQRFSTLEDTAPQLKAAMTHGALLGGKRIRPFLVYSVGQMFGV
PLEKLDACAAAIECIHAYSLIHDDLPAMDDDALRRGQPTVHIAFDEATAILAGDALQTLA
FEIVTEAVPGITSEQHIAMVRALAKASGYRGMCGGQAIDLASTDKHIDLKALTQLHNMKT
GALISCAVELALIAANAPKDQYQTMMEFAHAVGLAFQVQDDILDIIATTEELGKPQGSDA
ESNKSTFPQLLGLQGAKDTATQLIQEALSALAKLPYNSQLIADFARYIIERRI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgttagtcaatgcaataaaagaatatcaactgcgggttgatgaccaattaaaacaacgt
tttagtacactcgaagatacagctcctcagttaaaagccgcgatgacccatggcgccctt
ttagggggaaaacgcattcgtcccttcttggtttacagtgtggggcaaatgtttggcgta
ccacttgaaaaactcgatgcctgcgccgccgccattgaatgtatccatgcctattcgtta
atccatgacgatttacccgccatggatgatgatgcgcttcgccggggtcaacccactgta
catatcgctttcgatgaagccaccgccatacttgctggcgatgcactgcaaaccttagcc
tttgaaattgtgactgaagcagtccctgggattacgagcgagcaacatatcgctatggtc
agggcattggcaaaagcctcgggttatcgggggatgtgtggcggtcaagctatcgactta
gcttctaccgataagcacattgatcttaaagcattaactcaactacataatatgaaaaca
ggggcgcttatcagctgcgccgttgagttagcgttgattgccgcgaatgcgccaaaagat
caatatcagactatgatggaatttgcccacgcggtaggacttgccttccaagtgcaagac
gatattctggacattattgccaccacagaagaactcggcaaaccccaaggctccgatgcc
gagtcaaataagagtacttttccgcaactacttggactgcaaggcgccaaagataccgcc
acgcaactgatccaagaggcactatcagcgctggctaaattgccatacaatagccagtta
attgcagacttcgcccgctatattattgagcgaagaatataa
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