Schaalia odontolytica: FBF35_05170
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Entry
FBF35_05170 CDS
T05977
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
soo
Schaalia odontolytica
Brite
KEGG Orthology (KO) [BR:
soo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
soo03051
]
FBF35_05170 (pafA)
Enzymes [BR:
soo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
FBF35_05170 (pafA)
Proteasome [BR:
soo03051
]
Prokaryotic proteasome
Bacterial regulatory particles
FBF35_05170 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Motif
Other DBs
NCBI-ProteinID:
QCT35455
LinkDB
All DBs
Position
1173480..1174865
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AA seq
461 aa
AA seq
DB search
MRRRVFGIETEYGLTAASPSGGAPMDAEHAARQLFEPLLHQGRSSNLFLRNGGRLYLDVG
AHPEYATAECDRLEDLLEQDRAGAAMLADLAVQADEALSELGSDLHLHLFRNNLDSQGNS
YGCHENYLLHRRRDFRQVADALVAFFVTRQILVGNGWINTAAATPRLQFSQRADQMWDAV
SSATTRSRPIINTRDEALADSGAYRRMHVIVGDTNVAEPTTALKVGMTELLIHAIEDGLQ
IEDLALADPMRAIREVNSDLSGSAPLELANGRTTSAVALQREIRERVLARIPVAELDPMR
AYVVDLWGRGIDAIASGDWSSIDTELDIAIKHKLLTSYCARSGASLADPRVARLELSYSD
ITADGLWERMERAGLMRRLTTVEGVRRAQTIAPATTRAHLRGRIIAAAEDARADLSVDWV
HVRLDESSTIPLSLQDPLATTDPRVDALIAQIDSQSPTIPA
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
gtgaggcgtcgagttttcggcatcgaaacggagtacgggctcacggccgcgtccccgagc
gggggcgccccgatggatgccgagcacgccgctcgccagctgttcgagccactcctgcat
caggggcgctcctcgaacctgttcctacgtaacggcgggcgcctctaccttgacgtgggc
gctcatcccgagtacgcgactgccgagtgcgatcgtcttgaggatttgctcgagcaggat
cgcgccggcgccgccatgcttgctgatctggcggttcaggcagacgaggccctttccgag
ctcggctcggacctgcacctgcacctgtttcgcaacaacctggactcacagggtaactcc
tacggctgccacgaaaactatcttctccatcggcgccgcgacttccgtcaggtcgccgat
gcgctcgtcgcattcttcgtcacgcgccagattctcgtcggtaacggctggatcaacacc
gctgcggcgacgccgcgcctccagttctcccagcgcgccgatcagatgtgggacgccgtg
tcctccgcgaccacgcgctcgcgtccaatcatcaacacgcgcgacgaggccttggctgat
tctggcgcatatcgacgcatgcacgtcatcgtcggcgacacgaacgtcgccgagccgact
accgcgctaaaggtcggtatgaccgagctcctcatccacgcgatcgaagacggtctgcag
atcgaagacctggctcttgctgatccgatgcgggcgattcgggaggtcaactcggatctg
tccggctcggcacccctcgagcttgccaacggtcgcacgacgagcgccgtcgcgctgcaa
cgagagatccgtgagcgcgtactggcccgtattcccgtcgcggagctggatccgatgcgc
gcctacgtcgtcgacctgtggggcaggggcatcgatgccatcgccagcggcgactggagc
agcattgacaccgagcttgacatcgcgatcaagcacaagcttctcacgtcgtactgcgcg
cgcagtggggcgagcctcgctgatccgcgcgtggctcgactcgagctttcgtactccgat
atcaccgctgatggcctgtgggagcgaatggaacgcgcgggactcatgcgtcgcctcacc
accgtcgaaggtgtccgtcgcgcgcagacgattgcacctgcgacaacccgcgctcacctg
cgcggacgtatcatcgcagccgccgaggacgcccgcgcagacctgagcgtcgactgggtg
cacgtgcgtctcgatgaatcgtcgacgattccgttgtccttgcaggatccgttagccacc
accgacccgcgtgttgacgcgctcatcgcgcagatcgactctcagtctcctacgattccc
gcatga
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