Spirosoma oryzicola: LQ777_16845
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Entry
LQ777_16845 CDS
T08981
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
soq
Spirosoma oryzicola
Brite
KEGG Orthology (KO) [BR:
soq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
soq03110
]
LQ777_16845 (clpB)
Chaperones and folding catalysts [BR:
soq03110
]
Heat shock proteins
HSP100
LQ777_16845 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
Clp_N
AAA_16
Sigma54_activat
AAA_22
nSTAND3
AAA_14
ATPase_2
Zeta_toxin
bpMoxR
AAA_18
AAA_7
IstB_IS21
AAA_3
AAA_19
Torsin
ResIII
NACHT
NBD_SMAX1
DNA_pol3_delta2
T2SSE
DUF87
Motif
Other DBs
NCBI-ProteinID:
UHG89910
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Position
3972789..3975410
Genome browser
AA seq
873 aa
AA seq
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MDFKNYTVKAQEVVQKASEIALGNGQQAIETGHLLQAILSEDENVIGFITKKLGINLQNT
TGALQAILTTYPKISGGNGSVYLSNDTAAALAKASNYTKEFGDEFVSVELMLLGLMAGKD
QIATLLRDAGFNEKQVKTAINELRKGNSVKNQNAEATYQSLERYSINLNERARTGKIDPV
IGRDEEIRRVLQILSRRTKNNPILLGEPGVGKTAIVEGLAQRIVSGDVPENLKTKTLVSL
DMGLLIAGAKYKGEFEERLKSVIKEVTDSNGEIILFIDEIHTLIGAGAGGEGAMDAANLL
KPALSRGELHTIGATTLKEYQKYIEKDKALERRFQAVMVDEPDMADAISILRGIKEKYEL
HHGVRIKDDAVIASVELSTRYITDRFLPDKAIDLMDEAAAKLRLEMDSVPEELDELNRRI
MQLEIEREAIRRENDKEKESLLNKQIADLTEQRSSLQAKWETEKASVNEGRTLKEQLDQL
RFEAEQAERTGDYGKVAEIRYGRIPEIETKLNSLAQEGGDKGGSDRMMQEEVTAEDIAEV
VAKWTGIPVSKMMQSDREKLLNLEKELGKRVAGQQEAIEAVSDAVRRSRAGMQDPKRPIG
SFIFLGTTGVGKTEVARTLAEYLFNDENAMIRIDMSEYQERHAVSRLIGAPPGYVGYDEG
GQLTEAVRRKPYSVVLLDEIEKAHPDVWNILLQVLDEGRLTDNKGRVANFKNTIIIMTSN
IGSHLIQEKFAEDEGWNHSLVLEEAKSAVMELLKQTIRPEFLNRIDEIVMFEPLTQANIR
KIVDIQFNEIKKRLAENGVQLDATDEALTKLGEEGFDPQFGARPLKRVLQRRVLNELSKA
ILSGEVKKDSVVLMELNNDGEIAFTNLDAEIEL
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atggattttaagaattacaccgtaaaagcgcaggaggtcgttcagaaggcttccgagatc
gcccttggcaatggccagcaggcgattgaaaccggtcatctgctccaggctatcctgtcg
gaggatgaaaacgtaatcggtttcattaccaagaaacttggcattaatttacaaaataca
acgggtgcgttacaggccattctcacgacttacccaaagatttcaggcggtaatggtagt
gtgtatctgagcaacgacacagccgcagcgttggccaaagccagcaattatacaaaagag
tttggcgacgaatttgtgagcgttgaactgatgctgcttgggctaatggcaggtaaagat
caaattgcaacgttattacgcgacgccggtttcaacgaaaaacaagttaaaaccgcgatc
aacgaacttagaaaagggaattccgtgaaaaatcaaaacgccgaagcaacctaccagtca
ctcgaacggtatagcatcaacctgaacgaacgggcacgcacgggtaagatcgacccggtg
attggccgggatgaagaaatccggcgggtgcttcaaatcttaagccgtcggactaaaaac
aacccgattctgcttggtgagccgggcgtcggtaaaacggctattgttgaaggacttgcc
caacgtattgtatcgggtgacgttcccgaaaacctgaaaacaaaaacgcttgtctcgctc
gacatgggtctgctgattgcgggggccaaatataaaggcgagttcgaagaacgcctgaaa
tcggtcatcaaagaggtgacggactccaacggtgaaatcattctgttcatcgacgagatt
cacacgcttattggtgcgggtgcgggcggagaaggcgctatggacgcggccaacctgtta
aaaccagccttatcgcgcggtgaactccacaccatcggtgccacgacactgaaggaatac
cagaaatacatcgagaaagataaagcgctcgaacgtcgattccaggccgtaatggtcgat
gaaccagacatggccgacgccatctcgattctgcgcggtatcaaagaaaagtacgagttg
caccacggcgttcggatcaaagacgatgcagtcattgcttctgtcgagctgtctacgcgc
tatattaccgaccgtttcctgcccgacaaggccattgacttgatggacgaggctgctgct
aaactgcgtctggaaatggattcggttccggaagaactggacgaactcaaccggcgcatt
atgcagctggaaattgagcgggaagccattcggcgggaaaacgacaaagaaaaagaaagc
ctgctgaacaagcagatcgctgacctgaccgaacagcggagtagtctgcaagccaagtgg
gaaaccgaaaaagcgtcggtcaacgaaggccggacactgaaagagcaactcgatcagtta
cgctttgaagccgaacaagccgaacgaacgggcgattacggaaaagttgccgagattcgc
tacggtcggattcctgagatcgaaacaaaactcaactcgctggcgcaggaaggtggcgac
aaaggtgggtcagatcggatgatgcaggaggaagtgaccgccgaagacattgccgaagta
gtggctaaatggacgggcattccggtttcgaaaatgatgcagagtgatcgcgaaaaactg
ctcaacctggagaaagaactgggtaagcgggtagctggtcagcaggaagcgattgaagca
gtgtcggatgccgttcgccggagccgggcgggtatgcaggaccccaaacggccaatcggt
tcgtttatcttccttggtacaacgggggttggtaaaacggaagtcgcccggacattagcc
gaatacctcttcaacgacgagaatgcgatgatacgaatcgacatgtcggagtatcaggaa
cgtcacgccgtaagccgactgattggtgctcctccgggatacgttggctacgacgaaggt
ggtcagttgaccgaagcggtgcgccggaaaccttactcggtcgttttgctcgatgagatc
gaaaaagcacaccccgatgtctggaacatcctgttgcaggtgcttgatgagggtcgtctg
acggataacaaaggccgcgtagcgaacttcaagaatacgatcatcatcatgacttccaac
atcggtagccatctgattcaggagaaatttgctgaagacgaaggctggaaccattcgctg
gtgctggaagaagcgaaatcagccgtgatggagttgctgaaacaaaccatccgccctgaa
ttcctgaaccggattgacgaaatcgtgatgttcgaaccgctgacgcaggccaacattcgc
aagattgtcgatattcagttcaacgagatcaagaaacggctagccgaaaatggcgtacag
ctcgacgcgacggacgaagctcttaccaagcttggcgaagaaggcttcgatccccaattt
ggcgctcgcccgctgaaacgcgtactgcaacgccgggtcttgaacgaactgtctaaagcg
atcttatccggtgaggtgaagaaagactcagtcgtactgatggagttgaacaacgatggc
gagattgccttcaccaacctcgacgctgaaatagaattataa
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