Streptococcus oralis: SOR_1179
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Entry
SOR_1179 CDS
T01476
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sor
Streptococcus oralis
Pathway
sor03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SOR_1179
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sor03400
]
SOR_1179
Enzymes [BR:
sor01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SOR_1179
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SOR_1179
DNA repair and recombination proteins [BR:
sor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SOR_1179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn-ribbon_8
DZR
Auto_anti-p27
zinc-ribbons_6
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-ProteinID:
CBZ00837
UniProt:
F2QDW8
LinkDB
All DBs
Position
complement(1154302..1155126)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETVRRGLEKLILGKKISSIEIAYPKMIKTDLDEFQREVPGQVIESVGRRGKYL
LFYLTNKVLISHLRMEGKYFYYPDQVPERKHAHVFFHFEDGGTLVYEDVRKFGTMELLAP
DLLDAYFISKKLGPEPKEQDFDLQVFQAALAKSKKPIKSHLLDQTLVAGLGNIYVDEVLW
RAQVHPARPSQTLTAAEASAIHDQTIAVLGQAVEKGGSTIRTYTNAFGEDGTMQDFHQVY
DKAGQACSRCGTLIEKFQLGGRGTHFCPQCQRRG
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaccgttcgtcgtggcttagaaaaattgattttggga
aagaagatttcgagtatagagattgcttatcctaagatgatcaagacagatttggatgag
tttcaaagggaagtgcctggccaagtaattgagtccgtggggcgccgtggaaaatatttg
cttttttacctaacaaacaaggtcttgatttctcatttgcggatggagggcaagtatttt
tactatccagaccaagttccagaacgtaaacacgcccatgttttcttccattttgaggat
ggcggcactcttgtatatgaggacgtacgcaagtttggtactatggaactgctggcaccc
gaccttttggacgcctactttatttctaagaaactaggtcctgagccaaaagagcaggat
tttgatttgcaggtctttcaagctgccctagccaaatctaagaagcctatcaaatctcac
cttttagaccagaccttggtagctggccttggcaatatctatgtagatgaggtcctctgg
cgagctcaggttcatccagcaagaccttcgcaaactttgacagcagcagaagcgtcagct
attcatgaccagaccattgctgttttggggcaggctgttgaaaagggtggctctaccatt
cggacctataccaatgcctttggggaagatggaaccatgcaggattttcatcaggtctat
gataaggctggtcaagcatgttcacgctgtggcaccctcattgagaaattccagctcggt
ggaaggggaactcatttttgtcctcagtgtcaaaggaggggctaa
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