Solanum tuberosum (potato): 102578838
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Entry
102578838 CDS
T02981
Name
(RefSeq) probable pectate lyase 13
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sot
Solanum tuberosum (potato)
Pathway
sot00040
Pentose and glucuronate interconversions
sot01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
102578838
Enzymes [BR:
sot01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
102578838
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Ortholog
Paralog
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
WSS_VP
Motif
Other DBs
NCBI-GeneID:
102578838
NCBI-ProteinID:
XP_006361698
UniProt:
M1D2F0
LinkDB
All DBs
Position
Un
AA seq
490 aa
AA seq
DB search
MFSVICILLFCLLISFFPQIIVSFNLTLPHQHPYPDAVVQEVQRKVNESISRRQLWNTTM
NAITTQCETGNPIDDCWRCDPNWSKNRQRLADCAIGFGQNAIGGKNGKYYVVSDSSDLDT
VNPTPGTLRYAVIQEEPLWIIFSGDMFIKLKHELIVNSYKTIDGRGAKVHITGNGCITLQ
YISNVIIHNIHIYNCLPSGNTDIRSTPTHVGHRGRSDGDGISIFASRNIWIDHCALSHCT
DGLIDAIMGSTGITISNSYFSHHDEVMLLGHDDKYLPDAGMQVTIAFNHFGVGLVQRMPR
CRRGYIHVVNNDFTEWQMYAIGGSANPTINSQGNRYTAPLDANAKEVTKRVETDEGEWSG
WNWRTNGDVMVNGAFFVPSGEEGLGNQYAKASSVEPKSAAIIDQLTLNAGVFGAPRDKSI
SISYGGGTTTGASGSGGGGSTGAGDDSDFFGMMFGSGAPQKISSTTYYTILLSHLIILFL
YTNQLFLILL
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgttttctgtcatatgcattctcttgttttgtttgttaatctctttttttcctcaaatt
atagtttcctttaatctcacacttcctcatcaacatccttaccctgatgctgtggttcaa
gaagtacagaggaaagtgaacgaatcgatttcgagaaggcaactatggaacaccaccatg
aatgccataactacccaatgtgaaaccggaaatcccatagacgattgctggcgctgcgat
ccaaattggtcgaaaaaccggcagcgcttagccgattgcgcaatcggcttcggccagaac
gcaatcggaggtaaaaacggcaaatactacgtcgtttccgattcctccgatctcgacacc
gtaaatccaactccgggaacactccggtacgccgtaatccaggaagaaccactctggatc
atcttctccggcgatatgttcataaaattgaaacatgaactcatcgttaacagttacaaa
acaatcgacggccggggagcgaaggttcacatcaccggtaacggatgtataacgttgcag
tatattagcaatgtgattatacacaatattcatatttacaactgtttaccgtcggggaat
actgatatacggtcgacgccgacgcatgtcggtcaccggggtagatcggacggcgacggg
atctcgatatttgcgtcacggaatatatggattgatcattgtgcattatcgcattgtact
gatggcttaattgatgctatcatggggtccactggtataacgatctctaatagctatttc
agtcaccatgatgaagttatgctactgggacatgatgataagtacttgcctgatgctgga
atgcaggtgacaatagcattcaatcattttggagtagggctagtacaaagaatgccaaga
tgtagaagaggatatatacatgtagtcaacaatgattttactgaatggcaaatgtatgca
attggaggaagtgctaatcctactattaatagtcaaggcaatcgatatactgccccactc
gatgcaaatgctaaagaggtgacaaagcgcgtggagacagacgagggggagtggagtggg
tggaactggagaacaaatggagacgtaatggtaaatggagcattttttgtgccatcaggt
gaagaaggacttggcaatcaatacgcgaaagcctcgagcgtggagcccaaatccgctgct
attattgatcaacttacacttaatgccggtgtttttggtgccccaagggataaaagtatt
agtatatcatatggaggagggaccaccaccggagctagcgggagcggtggtggcgggtcc
accggcgccggcgatgatagtgatttttttggaatgatgtttgggagcggcgcaccacaa
aaaatatcatcaaccacttattatactatcttattatctcatttaattattttatttttg
tacaccaaccaattatttttaatcttactatag
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