KEGG   Solanum tuberosum (potato): 102594042
Entry
102594042         CDS       T02981                                 
Name
(RefSeq) crooked neck-like protein 1
  KO
K12869  crooked neck
Organism
sot  Solanum tuberosum (potato)
Pathway
sot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102594042
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sot03041]
    102594042
   03036 Chromosome and associated proteins [BR:sot03036]
    102594042
Spliceosome [BR:sot03041]
 Complex B
  Other components
   Prp19-related factors
    102594042
 Complex C
    102594042
Chromosome and associated proteins [BR:sot03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Other centrosome duplication proteins
     102594042
SSDB
Motif
Pfam: HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_Syf1_CNRKL1_C TPR_14 HAT Suf TPR_19 TPR_16 HAT_Syf1_M U3_assoc_6 Talin_IBS2B
Other DBs
NCBI-GeneID: 102594042
NCBI-ProteinID: XP_006339106
UniProt: A0ABQ7WI49
LinkDB
Position
Un
AA seq 675 aa
MASVSLARAMRVKNKTPAPIQITAEQIFREARERQEAEIRLPKQKISDPTEGADYRLRKR
KEFEGLISRVGWNKSVWVKYAEWEESQKDLKRARSIWERALGVDALNRDHTIWLKYVDME
MKNKFVNHARNLWDRAVIRLPRVDQLWYKYIHMEEMLGNVAGARQIFERWMRWMPDQQGW
LSYIKFELRYNEIERAREIFERFVECHPKVSAWIRFSKFEMKNGEIGRARNCYERAVDKL
GDDDDEAEQLFLAFAEFEDKCKETDRARCIYKFALDQIPKGRAEDLYGKFVAFEKQYGDR
EGIEDAIVGKRRFQYEDQVKMNPRNYDTWFDYIRLEESIGNKERIREVYERAIANVPPAE
EKRYWQRYIYLWINYALYEEIDAQDMERTRHVYLECLKLIPHHKFSFAKIWLLAALFEIR
QLRLKEARLLLGEAIGRAPKDKIFNKYIEIELQFGNIDRCRKLYEKYLEWSPENCHAWSK
FAGLERSLYETERARAVFELAIDQPALDIPELLWKAYIDFEISEGEFERTRALYERLLNR
TKHLKVWISYAKFEASAMESDVEQKKKCLQNARDVFERTVSYLRISAPELKEERGMLLEE
WLNMENSFGELGDVNLVHAKLPKKLTKRRQIDMEDGPAVYEEYIDYLFPEEMQANNLNIL
ASAYKWKKQRVASED
NT seq 2028 nt   +upstreamnt  +downstreamnt
atggcttcagtatctcttgctagagctatgcgggtgaagaacaaaacccctgccccaatc
caaatcacggcagagcagattttccgggaagctagagaacgtcaagaggcggaaatcaga
ctgcccaaacagaaaatcagtgacccaacagaaggagctgattatcgccttcgcaagcga
aaggaatttgagggtttaattagccgtgtaggctggaacaagagtgtgtgggtgaaatat
gctgaatgggaagaatcacaaaaggacttgaagcgtgctcgttctatatgggaacgtgca
cttggagttgatgcacttaaccgtgaccataccatctggttgaagtatgttgatatggag
atgaagaataagtttgttaatcatgctcgtaatctatgggatcgagctgttatccgtttg
cctagggttgatcagttgtggtacaagtatattcatatggaagagatgcttggcaatgta
gctggtgcaagacagatttttgagaggtggatgaggtggatgccggaccagcaagggtgg
ttatcttatattaagtttgagttaaggtataatgaaatagagagggcaagagaaattttt
gagagatttgtggagtgtcatccgaaagttagtgcttggattaggttctcaaaatttgag
atgaagaatggggagattgggagggcaaggaattgttatgaaagggctgtggataagttg
ggagatgacgatgacgaagctgagcagttgtttctggcattcgcagagtttgaggacaag
tgtaaggagacggacagggcacgttgcatatataaatttgcccttgatcagataccaaaa
gggcgagctgaggatttgtacggcaagtttgtggcatttgaaaagcagtatggtgatagg
gaaggtattgaggatgctatagttggaaaaaggaggtttcagtatgaggatcaagtcaag
atgaatccacgtaactatgatacatggtttgattatattcgtctagaagagagcattgga
aataaagagaggattagagaggtttatgagagagccattgctaatgttcctcctgctgaa
gagaagcggtattggcaacgatacatttacttatggattaattatgcattatatgaagag
attgatgcacaagacatggaaagaaccagacatgtttacctggagtgtcttaagctgatt
ccacatcacaagttttcatttgcaaagatttggttgttggctgccttgtttgagattcgg
cagttaagactcaaggaggcacggcttctacttggagaagcgattggaagggctcctaaa
gacaagatatttaataagtacattgagatagagctgcaatttgggaacatagatcgttgc
agaaagctttatgagaagtacttagaatggtcaccagaaaattgccatgcttggagcaaa
ttcgccgggttagagaggtccttgtatgaaacggagagagccagagctgtttttgagctt
gcaattgatcaacctgcactggatattccagagttactatggaaggcttacatagacttc
gagatctctgagggtgaatttgaaagaacaagagcactatatgaaagacttcttaaccgt
accaaacatttaaaggtgtggataagttatgccaagtttgaggcatcggctatggaatca
gatgttgaacagaaaaagaagtgcctgcaaaatgctagagatgtttttgagaggaccgtt
tcttacttaagaatatctgcacctgaactgaaggaagaaagaggaatgcttttggaagaa
tggctaaatatggaaaacagttttggtgagcttggagatgtcaatttagtccatgccaaa
ctaccaaagaaactgacgaagagaaggcaaatagacatggaggatggtccagcagtctac
gaggagtacatagactatcttttccctgaagaaatgcaggcgaacaatcttaacattttg
gcttctgcttataaatggaagaaacagcgggttgcatccgaggattag

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