Solanum tuberosum (potato): 102604147
Help
Entry
102604147 CDS
T02981
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
sot
Solanum tuberosum (potato)
Pathway
sot03030
DNA replication
sot03410
Base excision repair
sot03420
Nucleotide excision repair
sot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
102604147
03410 Base excision repair
102604147
03420 Nucleotide excision repair
102604147
03430 Mismatch repair
102604147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sot03032
]
102604147
03400 DNA repair and recombination proteins [BR:
sot03400
]
102604147
DNA replication proteins [BR:
sot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
102604147
DNA repair and recombination proteins [BR:
sot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
102604147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
Rad17
AAA_30
AAA_5
AAA_22
DNA_pol3_delta
AAA_19
BRCT_2
AAA_assoc_2
RuvB_N
AAA_14
Gp44_lid
AAA_18
nSTAND3
AAA_17
NTPase_1
PHTB1_C
AAA_16
Sigma54_activ_2
Zeta_toxin
KTI12
RNA_helicase
RsgA_GTPase
AAA_33
SurA_N
Bro-N
AAA_3
Motif
Other DBs
NCBI-GeneID:
102604147
NCBI-ProteinID:
XP_006343612
LinkDB
All DBs
Position
Un
AA seq
993 aa
AA seq
DB search
MSDIRKWFMKQHDKGTGNGSMSKNSAAEKPSLISPKPENLVQEGQETTNRRKTSKYFATD
KVKAKEEKVEEVSAKRKAQSTAGSSSANERPPAAKKIHKAEDDDDFVPLVSGRGSAQKNV
ISDDSDDDLKNKKSDLKPGGRGRGGRAAKTSGKGVPLDESEDDASAVKDNKSGGRGRGGK
GPSAAPSGGRGRGGGGRGGFMNFGERKDPPHKGEKEVPEGAPDCLAGLTFVISGTLDSLE
REEAEDLIKRHGGRVTGSVSKKTTYLLCDEDVEGRKSSKAKELGTAFLTEDGLFELIRSS
KKSKSATQPESKKSADIIVSSGKRNSQNTSDGTGSTATKILAAKPLAPSASPAKSSASPA
KRKTQAKESLLPWTEKYRPKAIVDIIGNKSLVEQIQRWLESWDEHFLKAASKGKGKKQND
SGAKKAVLLSGMPGIGKTTSAKVVSQMLGFQTIEVNASDSRGKADSKIEKGISGSTANSI
KELVSNESLSANIGRSHHQKTVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDR
YSQKLKSLVNYCLPIVFRKPTKQQMAKRLKQVANAEGIQVNEIALEELAERVGGDMRMAL
NQLQYMSLSKSVIQYDDIRRRLLSSSKDEDISPFKAVEKLFDFNAKNLKIDQRIDLSMSD
PDLVPLLVQENYLNYKPSSAGKDDNDLKRMSLIAHAADSIANSDLINVQIRRYQQWQLSP
AGCLSSCIIPASLLHGQRQTLEQGERNFNRFGGWLGKNSTMGKNYRILEELHVHLLASRE
SYLGRANLRLDYFSLLGKKLTDPLKMLPKDEAVENVVAFMDSYSISQEDFDNIVEISKFK
GHLNLLDGVQPAVKAALTKAYNKGSKSRVIRTADLITLPGIKKAPKKRIAAMLEPLDEGV
AEENDETLAEDEENSSETEDIADVGKKLQSDLQSLSSRGIQVNMDLKGAGSSGGKKPSAG
RGRGRGSSNSSASAESSGKRGGRGSGAAAKRKR
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatatcaggaaatggttcatgaagcagcatgacaaaggcacgggtaatgggagt
atgtccaagaatagtgcagcagaaaagccttctctcattagtccaaagccagaaaacctg
gtacaagaaggacaagagactaccaacagaaggaaaactagtaaatattttgctacagac
aaggtgaaggcaaaagaagaaaaagttgaggaagtgtcagcaaaaagaaaagctcaaagt
actgctggaagttcatcagctaatgagaggccaccagctgcaaaaaaaattcacaaagct
gaggatgatgatgactttgtaccattggtatctggaaggggatctgcgcagaaaaatgtg
atcagtgatgatagtgacgatgatcttaagaacaaaaaatctgatctcaaacctggtgga
agagggcggggaggacgggcagctaagaccagtggaaagggtgtccctcttgatgaaagt
gaagatgatgcctcagctgtcaaggacaacaaatctggtggacgagggcgtggtggtaaa
ggaccatctgcagcaccaagcggtggacgaggtagaggtggtggaggacggggaggtttc
atgaactttggtgaaagaaaagaccctcctcacaagggggaaaaggaagttcctgaaggt
gccccagactgtttagctggtttgacttttgtaattagtggaactctcgacagtttagaa
agagaagaagctgaggatttgattaaacgccatggtggtcgtgtcacaggatctgttagc
aagaaaacgacttatcttttatgtgatgaagacgtcgagggacggaaatcatctaaagcc
aaggagctcggaactgcatttctcactgaggatggtttgtttgaattgatccggtcatcg
aaaaaatcaaaatcagctacacaacccgaatcaaagaaatctgcggacatcattgtttct
tctggaaagagaaattcacaaaatacaagtgatggaactggaagcactgccacaaagatt
ctagctgccaaaccattggcacctagtgcatctcctgccaaaagtagtgcatctcctgcc
aagaggaaaacccaagctaaagagtctttactaccatggacagaaaaatacaggcccaaa
gctattgtagacataataggaaacaagtcactggtggagcagattcagcgttggctagag
agctgggatgagcattttctaaaggcagctagtaagggtaaggggaaaaaacagaatgac
tctggtgctaaaaaagcagttctgttgagtggtatgccgggtatagggaagactacatca
gcaaaagtggttagtcagatgctgggttttcaaaccatcgaggtaaatgctagtgatagt
cgtggaaaggccgactcaaaaattgagaaaggaattagcggaagtactgctaattccata
aaagaacttgttagcaatgaatctctaagtgctaatattggcagatcacaccatcagaag
actgttctgattatggacgaggttgatggcatgtctgctggagatagaggtggtgttgct
gatcttattgctagcatcaagatctcgaaaattcctattatctgcatttgcaatgatcgc
tacagtcagaaattgaagagccttgtcaattattgcctaccaattgtcttccgtaaacca
actaagcagcagatggcaaagaggttaaagcaagtggcaaatgctgaaggcattcaagtc
aatgagattgctcttgaggaattggcagaacgtgttggaggagatatgcgtatggctcta
aatcaattgcaatacatgagtctctccaagtctgtcatccaatacgatgatataagacgc
cgccttctaagcagttcaaaggatgaagacatctcaccgttcaaagctgtagaaaagctg
tttgattttaatgccaagaacttgaaaatagatcaaagaattgacctaagtatgagcgac
ccagatcttgtcccgcttcttgtccaggagaactatctcaactacaaaccaagttctgct
ggcaaagatgataatgatttaaagcggatgagcctaattgcgcatgctgctgactctatt
gcaaatagtgacttaataaatgtacagattcgaagataccagcagtggcaactttctcca
gctggttgcctttcgtcttgcataattcctgcttctttgttgcacggacagaggcagact
cttgagcagggagagcgcaactttaacagatttggtggctggctaggaaagaactctaca
atgggaaagaattaccggattctggaggaattgcatgttcacctactcgcatctcgtgaa
tcatatctgggaagggcaaacctgagacttgactacttttctcttcttggaaagaagttg
acagatccattaaaaatgctgcctaaggatgaagctgtagagaatgttgttgcttttatg
gattcatactctataagccaggaggactttgataatattgtggagatatcaaaattcaag
ggacatctgaatcttctggatggtgtacagcctgctgtgaaagcggcgctgacaaaggca
tacaacaaaggaagcaaatcacgtgtaattcgcacagcagatttaattacccttcctgga
attaaaaaagctccaaaaaagcgcattgcagcaatgctggagccactagatgaaggtgta
gctgaagaaaatgatgaaacactggctgaagatgaagagaattcatcagagacagaagac
atagcagatgttgggaaaaaattgcagtcggatcttcagagtctcagttcgagagggatc
caagtaaacatggacttgaagggtgccgggagttcaggtggcaagaagccgtctgcaggg
agaggaagaggaagaggaagttctaatagcagtgcaagcgctgaatcctcaggtaagaga
ggtggccggggttctggagctgctgccaagagaaagaggtga
DBGET
integrated database retrieval system