Stenotrophomonas oahuensis: PDM29_10260
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Entry
PDM29_10260 CDS
T10110
Name
(GenBank) glycosyltransferase
KO
K24658
O-antigen biosynthesis alpha-1,2-mannosyltransferase [EC:
2.4.1.371
2.4.1.-]
Organism
sou Stenotrophomonas oahuensis
Pathway
sou00542
O-Antigen repeat unit biosynthesis
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00542 O-Antigen repeat unit biosynthesis
PDM29_10260
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sou01005
]
PDM29_10260
Enzymes [BR:
sou01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.371 polymannosyl GlcNAc-diphospho-ditrans,octacis-undecaprenol 2,3-alpha-mannosylpolymerase
PDM29_10260
Lipopolysaccharide biosynthesis proteins [BR:
sou01005
]
O-antigen repeat unit
PDM29_10260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_1
Glyco_trans_1_4
GT4-conflict
Glyco_transf_4
Glyco_trans_1_2
DUF7691
Glycogen_syn
Motif
Other DBs
NCBI-ProteinID:
WNH50782
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All DBs
Position
2336801..2340487
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AA seq
1228 aa
AA seq
DB search
MRVLIDLQGCQTESRFRGIGRYSLSLAQAMARNAGDHEIWVAVNASFPEGIEEIRAGLDG
LVPQERIRAFHTLREVGWPHREDAWRREASERMWETFLQGLQPDIIHVSSLFEGSQGGAV
TSIGKLGSASIPTAVTLYDLIPLLNPDTYLGSEWVRSWYMDKVESLKRASLLLSISEHAR
SEALAAMEFEPSRIVNMSSAISPHFVPKAIGEAERTLLQSRFGIIGDYVMYSGAMEPRKN
AERLLEAFASLGPAHLAKTQMVIAGKIAPHDRARFDALVTRLGIADRVVLTGFITDEELI
LLYSGTSAYVFPSLHEGFGLPALEAMACGAPTIGSATTSVPEVIGRADALFDPADTDDIA
RSLRRVLEDADFAASLREHAAVQATRFSWDATAVTALKAMEAVVAGRPAQVRSWPASGEA
VHTGYDALINALGRLTAAAEPSEEDLRDAAVAIAGGVQANEQVARAGTLPDVLKWRIEGP
FDSTYSLALVNRCLAEALSARGHQVVLHSTEGPGDFAASPAFLQANPAVARLHEKEPQLP
AAQADVSSRLLYPPRVADMQSRVNALHLYPWEESGFPQPWMEDFNAHLQGLSCVSEHVRK
IMVDNGAGIPLTVCWNGVDHWEQVQAASDYAVPGKSRRFLHVSSCFPRKGVDVLLKAYGQ
AFTARDDVSLIIKTFANPHNEVHRWLEEAKRDHPAYPEVIIIEGDISDAQLKQLYAGCHA
LVAPSRAEGFGLPMAEAMLMGLPVITTAWGGQMDFCTPETAWLVDYTYVAADTHFNLYNS
VWAEPDAGSLATALREVHDATPAQVKARTEAARDLLMARFKWSDVAAKLEQDVRHFASAP
ALPKGKVGWVTTWNTRCGVASYTANLVACLAEPGIILAGHAQDRTFEDDDTVLRCWQQGE
GDMLEELSQAVERMNLDVLIIQFQYAFFDFPAFAAFLEAQKQAGRVVIVMMHATVDAAEN
PRKKLRHLAPALSRCDRILVHTVHDLNRLKAVGVDGNTALFPHGIMATRSAETAARSTAV
HVASYGFFLPHKGLLELIDAVALLVGQGVDVHLSMINAEYPVDVSRDQIAQARSKIEALG
LASRVRMVNDFLREEDSLAELVKADVVVFPYQGTGESSSAAVRYGLASGRPVAVTPLAIF
DDVGEIVHRLPGTAPADLAAGLSALVSAVRANDPLVAETQQRAARWRAEHSYPALSRRLE
NMARQLLQDLQQASPSYSASNIQEERTP
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgagagtattgattgacctgcagggctgccagacggaaagtcgattccgtggcatcggc
cgctattcactgtcattggcgcaggccatggcacgcaatgccggtgaccacgagatctgg
gtggcggtgaacgccagcttcccggagggaatcgaggaaatccgcgccggcctggacggg
cttgtgccccaggagcgcattcgtgccttccatacgttgcgcgaagtgggctggccacat
cgcgaggacgcttggcgacgtgaagcatctgaacgcatgtgggagacgttcctgcagggt
ttgcagccggacatcatccacgtatccagcctgttcgagggatcccagggcggcgctgtc
acgtcgattggcaagctgggttcggcttcgatcccgacggcagtcacgttgtacgacctg
attccgctcctgaatccggacacttacctggggtcggagtgggtgcgttcctggtacatg
gacaaggtggaatcgctgaagcgcgcgtcgctgctgctctcgatctctgaacatgcgcgc
agcgaagcgctcgcggccatggagttcgagccatcgcgcatcgtcaacatgtcgtcggcg
atttcgccgcacttcgttccgaaggcgatcggtgaggcagagcggacgttgctccagtcg
cgcttcggcatcatcggtgattacgtcatgtacagcggggccatggagccgcgcaagaat
gccgagcgtctgctcgaggccttcgcctcgctgggtcccgcccatctggcaaagacccag
atggtcatcgcaggaaagatcgcgccgcacgatcgcgcgcgcttcgatgcactggtgacc
cggctgggtattgccgaccgcgtcgtgctgaccggcttcatcaccgatgaggagctgatc
ctgctgtacagcggtacctccgcctacgtcttcccgtcgttgcatgagggcttcggcctg
ccggcattggaagccatggcgtgtggtgctccgaccatcggctcggccaccaccagcgtc
ccggaggtgattgggcgggctgatgcattgtttgaccctgccgacaccgacgacatcgcg
cgctcgctgcggcgagtgctggaggacgcggacttcgctgcctccctgcgcgagcatgct
gcagtgcaggcaacacgcttctcgtgggacgccacggcagtcaccgcgctgaaggccatg
gaggccgttgtggccggtcgccccgcgcaggtgcgcagctggcccgccagtggcgaggca
gttcacaccggctacgacgcgctgatcaacgcgctgggtcgcttgacggcggcagcagag
ccgtccgaagaagatcttcgcgatgccgccgttgccatcgccggtggcgtgcaggccaat
gaacaggtcgcgcgagccggcacattgcctgatgtgctgaagtggcgcatcgaagggcct
ttcgacagtacttacagtctggctctggtgaaccgctgcctggccgaagcgctctcggcg
cgtggccatcaggtcgttctgcattccaccgaagggccgggtgattttgcggcttcaccg
gccttcctgcaggccaacccggcagtggcccggctgcacgagaaggaacctcagcttccc
gcggcgcaggcggacgtcagcagccgcctgctgtacccaccacgagtggcagacatgcag
tcgcgggtcaatgcactgcacctttacccgtgggaggaaagcggttttccgcagccctgg
atggaggacttcaatgcacatctgcagggtctatcctgcgtgtcggaacatgtacgcaag
atcatggtcgacaacggtgccggcatcccgctgacggtctgttggaacggcgtggatcac
tgggagcaggtacaagccgcttcggactacgccgtgcctggcaagagccgtcgattcctg
catgtttcgtcctgcttcccgcgcaagggcgtcgatgtcctgctgaaggcctatgggcag
gcgttcaccgcccgtgatgacgtcagtctgatcatcaagacgttcgccaacccgcataac
gaggtgcatcgctggctggaagaggccaagcgcgatcatccggcgtatcccgaagtgatc
atcatcgagggcgacatcagcgatgcccagctgaagcagctgtatgcaggctgccacgcc
ttggtggctcccagccgcgcggaaggcttcggcctgccaatggcggaggccatgctgatg
ggcttgccggtgatcaccaccgcatggggtgggcagatggatttctgcacacctgagacc
gcgtggctcgtcgactacacctacgtcgccgccgacacgcatttcaatctttacaactcg
gtgtgggccgagcccgatgcggggtccctggcgaccgcgctgcgcgaggtgcatgacgcc
actccggcacaggtcaaagcgcgcactgaagccgcgcgcgatctgctgatggcgcgattc
aagtggtctgacgtggccgccaagctggaacaggacgtacgccatttcgccagcgcacca
gccctgccaaagggcaaggtgggctgggtcactacctggaacacgcgctgcggcgtcgcc
agctacaccgcgaatctggtggcctgtctggccgagcccggcattatcctggccggtcac
gcccaggaccgtacgttcgaagacgatgacacggtgcttcgctgctggcagcagggcgaa
ggtgacatgctggaagagctcagccaggccgtcgagcggatgaatctggatgttttgatc
atccagttccagtacgccttcttcgatttcccggcttttgcggcattcctggaagcgcag
aagcaagccggtcgcgtcgtcatcgtgatgatgcatgcaaccgtggatgcggccgagaat
ccgcgcaagaagctgcgtcaccttgcgccggccctgtcacgttgtgatcgcatcctggtg
cacaccgtgcatgacctcaaccggctgaaggccgtgggcgtggatgggaacacggcgctg
ttcccccacggcatcatggcaacgcgcagtgcagaaaccgctgcccgcagcacggcggtg
catgtggcgtcttacggcttcttcctgccgcacaagggcctgctggagctcatcgatgcc
gtggcgctgttggtcgggcagggtgtcgacgtgcacctgtcgatgatcaacgcggagtac
ccggtcgacgtctcaagggaccagattgcgcaggcccgaagcaagatcgaggcgctcggc
cttgccagccgtgtccgtatggtcaacgatttcctgcgggaagaggatagtctggccgag
ctggtcaaggccgatgtcgtggtcttcccctatcaaggcacgggcgaatcgtccagcgcg
gccgtccgctacggcctggcgtccgggcgcccggttgcggtcaccccgctggcgatattt
gacgacgtgggtgaaattgttcatcgtctgcccggtacggcacctgccgacctggctgcg
ggcttgtcagcactggtttcggccgtgcgtgccaatgacccgctcgtcgcagaaacccaa
cagcgtgccgcacgctggcgggccgagcacagctaccctgcgctgtcacggcgacttgaa
aacatggcgcgccagctgctgcaggatctgcagcaggcgtcgccctcctattccgcttcc
aacattcaagaagaacgcacaccatga
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