Stenotrophomonas oahuensis: PDM29_14060
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Entry
PDM29_14060 CDS
T10110
Name
(GenBank) TolC family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sou Stenotrophomonas oahuensis
Pathway
sou01501
beta-Lactam resistance
sou02024
Quorum sensing
Module
sou_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
sou00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PDM29_14060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PDM29_14060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sou02000
]
PDM29_14060
01504 Antimicrobial resistance genes [BR:
sou01504
]
PDM29_14060
Transporters [BR:
sou02000
]
Other transporters
Pores ion channels [TC:
1
]
PDM29_14060
Antimicrobial resistance genes [BR:
sou01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
PDM29_14060
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
PDM29_14060
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
PDM29_14060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WNH51475
UniProt:
A0ABY9YKR0
LinkDB
All DBs
Position
complement(3160347..3161735)
Genome browser
AA seq
462 aa
AA seq
DB search
MAGSLALLLSACASTGHYQVDAPTVPAAYGRGDAQINAPTEASVDSTEVARTDVRQDTWW
TGFQDPRLDRMIARALQANTDLASAGLAVQRARLQAGLADNNLWPQPSGSVSSSGSRAID
QSADWNRGSSAGVSLQWEIDLWGRLRTQRDIAQWEAQATEEDLQNTALLVVSDVATQYWT
LAFLNQSITAGQANLERLERTRDLVQARFDAGAVSRLEVRQASQSLEAQRSAQSALEQQR
VVARNALTVLLDGQPWPQADEPQVLESIGSPPLAEGLPAELLGRRPDLRAAELRLRNSLK
NIKVTATSYYPALSLSGGVNSSATSLSDVLRNPVATLGAGLSLPFLNIRQAQLDTKVAGT
DYQIAANSFRSTLYTALSEVDNALSARTQFATQVAASQASYDEAVEIERMYEVRYRVGAT
DLRTWLEAQQTRRDAELSLASIKQRQLINDVTLFKALGGSAG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttggctggctctctcgccttgctgctgtcggcctgtgccagcaccggtcactaccaggtg
gatgcgccgacggtgccggccgcgtatggccggggcgatgcgcagatcaatgcgcctacc
gaagccagcgtcgacagcaccgaggtcgcgcgcaccgatgtgcgccaggacacctggtgg
accggcttccaggacccgcgcctggaccgcatgatcgcccgtgccctgcaggccaacacc
gacctggcctcggccgggctggcagtgcagcgtgcccgcctgcaggccggactggccgac
aacaacctgtggccacaaccctcgggcagtgtcagcagcagcggcagccgcgccatcgac
cagagcgcggactggaaccgcggcagctcggccggtgtgtcgctgcaatgggaaatcgac
ctgtggggccgccttcgcacccagcgcgacattgcccagtgggaggcacaggccaccgaa
gaagacctgcagaacaccgccctgctggtggtcagcgacgtcgccacgcagtactggacg
ctggccttcctcaaccagtcgatcaccgccggccaagccaacctggagcggctggagcgc
acccgcgacctggtccaggcgcgcttcgatgccggtgcggtgtcacggctggaagtgcgt
caggccagccagagcctggaagcacagcgttcggcgcagagtgcactggagcagcagcgg
gtggtggcgcgcaacgcactgaccgtgttgctggatggccagccgtggccgcaggcggat
gagccgcaggtgctggaaagcatcggcagcccgccgctggccgagggcctgccggccgag
ctgctcggccgccgcccggacctgcgcgcggccgaactgcgactgcgcaacagtttgaag
aacatcaaggtcaccgcgaccagctactacccggcgctgagcctgagtggcggcgtgaac
agcagtgcgacctcgctgtcggatgtgctgaggaatccggtggccacgctgggcgctggc
ttgtcactgccgtttctcaacatccgccaggcgcagctggataccaaggtggcgggcacg
gattaccagattgccgcgaacagcttccgcagcacgttgtacaccgcactttccgaggtg
gacaacgcgttgtcggcgcgcacccagttcgccacgcaggtggcggcgtcgcaggcgtcg
tatgacgaggcggtggagatcgagcggatgtacgaggtgcgttatcgcgtaggtgcgacc
gacctgcgtacgtggctggaggcgcagcagacccggcgtgatgcggaattgtcgctggcg
tcgatcaagcagcggcagttgatcaatgatgtgacgttgttcaaggcgctggggggaagc
gcggggtga
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