Sitophilus oryzae (rice weevil): 115890390
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Entry
115890390 CDS
T07985
Name
(RefSeq) CCR4-NOT transcription complex subunit 10 isoform X1
KO
K12607
CCR4-NOT transcription complex subunit 10
Organism
soy
Sitophilus oryzae (rice weevil)
Pathway
soy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115890390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soy03019
]
115890390
Messenger RNA biogenesis [BR:
soy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115890390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_12
TPR_1
SRP_TPR_like
HSDR_N
Motif
Other DBs
NCBI-GeneID:
115890390
NCBI-ProteinID:
XP_030766475
UniProt:
A0A6J2YUF9
LinkDB
All DBs
Position
Unknown
AA seq
690 aa
AA seq
DB search
MTEKDQDKGPDIISDQEKDLALNALTELKKKNYLSCLQNINKLETNRPNDFKVLHNKVVV
EYFKSDLRKTEQFQKNLTSVCNQFKIKVDKLEEIDYCIAQFNQAVILYHQKQYTASQRIM
DRVYKFIEPMEDNLAKQVSLLAIELQLCLKQPDKALTLISYLENNLIYGGSLPLKGLDKN
GKDKKLPLPSPKPISEEIQKKLLKYKIRCYLLNHSISIAAKELKILLKDKSNIDALFMAS
NLEYLKGNISESLNILSKIPEDCLNYNDHGELSKIMYYNNMGILHHTLGKPNLACYHFQK
ALKEDIIFTQSLQKKGRWRDIYNSINFLKSFYCFSSISLDDKHLYSIGGSKYHELMYNLG
VSLLYAGRAAQAFECLIVCVRRYHRNSRLWLRIAECCIKVHKESNEVDFDLKKKQRELIV
EVVGSKNDQKVVLVDSMSKDKKYSVDSQSYAVPVPSLEFASLCLRNAKLLLPADAADIPP
VPLFLVPGVTPAAPPPSPSLAPSSPSCAKEIQMLKNSILVASSYVGLCLGDYIIALRHAN
ELLEQEQISNVHKLLGHLYSAECLVLLDKIPEALEHLNPENIKDITFEFSGLENSDSNEV
KTNPPPKWFPTNVASVQAVMQYNIAVCKTIRGQFDQASGILKQIWQLRTPDCQVPAHIIM
LVIYIELQLGHAETARSLLRQYAFPHRISG
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaaagatcaggacaaagggccagacataatatcagaccaagaaaaggacttg
gcattaaatgctttaacggaattgaaaaagaaaaactatttatcgtgtttgcagaatatc
aataaactcgaaactaacagacccaatgactttaaagtacttcataataaagttgtagtc
gaatattttaaaagtgatcttcgaaagacagaacagtttcaaaaaaacttgacatctgta
tgtaatcagtttaaaattaaggttgataagttggaagaaattgattattgcatagcacaa
tttaatcaagcagtcatcctgtatcatcagaaacaatatacggcatctcagagaataatg
gatagggtgtataaatttattgaaccaatggaagataatttagcaaaacaagtcagtctt
cttgctatcgaattgcagttatgcttgaagcagcccgataaagcattaacattaataagc
tatttagagaataatttaatatacggtggaagtttaccactgaagggtttagataaaaat
ggaaaagataagaagctacctttacctagtccaaaaccaatatcagaagaaatccagaaa
aaattgctgaaatataaaatcagatgctatttgctaaaccattctatatctatagctgca
aaagaacttaaaatattactaaaagataaatctaatattgatgcactgttcatggcttcc
aatttagaatatttgaaaggaaatataagtgaatcattgaatatattgtccaaaatccca
gaagattgtttaaattacaatgaccatggcgaattatctaaaataatgtactacaataac
atgggcattttgcatcataccttaggcaaacccaatttagcttgttaccattttcagaaa
gccttaaaggaagacattattttcactcagagtctacagaaaaaaggcaggtggagagat
atatataatagtattaattttttaaaatcattttattgtttttcatctatttctttagac
gacaaacatttgtattctattggaggatccaaatatcacgaattaatgtataatttgggc
gtttcattgctctatgctggcagagctgctcaagcatttgaatgtttaattgtatgtgta
aggaggtatcatagaaattctagattgtggctcagaattgctgaatgttgtattaaagta
cataaagagtcaaacgaggtggatttcgatttgaagaagaaacaaagagagttgattgtt
gaagtagttggatccaaaaacgatcaaaaagtagttttggtagacagtatgtccaaagat
aagaaatacagtgtagatagccagtcctatgccgttccagtaccatccttggaatttgcc
tcgctgtgtcttcgaaatgcgaaacttctgctgcctgctgatgcggcagatatccctcct
gtgccgttatttttagttccaggggtgacaccagccgcgccaccgcccagccctagttta
gccccctctagcccttcatgcgctaaagagattcagatgcttaaaaatagtattttggtg
gccagtagttatgtaggattgtgcttaggagattacatcatagctttaagacatgctaat
gaattactggaacaagagcagatatccaacgtgcataaattgctgggacacttgtattca
gccgaatgcctagttctattagacaagattccggaagcgttggaacatttaaatccggag
aatatcaaagatattaccttcgaattttccggattggagaacagtgacagtaatgaagtt
aaaaccaatccacctccaaaatggtttccaaccaacgttgccagcgtgcaagccgttatg
cagtacaacatcgcagtgtgtaaaacgatcagaggccagttcgaccaagcttccggtatt
ttgaaacagatctggcaattgcgcacccccgactgtcaagtgccagctcacattatcatg
ttggtgatttacatcgaattacaactaggacatgctgaaacagccagaagtttgttaaga
cagtatgcttttccacatcgaatatccggatga
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