Spathaspora passalidarum: SPAPADRAFT_138036
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Entry
SPAPADRAFT_138036 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SPAPADRAFT_138036
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spaa03041
]
SPAPADRAFT_138036
03400 DNA repair and recombination proteins [BR:
spaa03400
]
SPAPADRAFT_138036
Spliceosome [BR:
spaa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
SPAPADRAFT_138036
DNA repair and recombination proteins [BR:
spaa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
SPAPADRAFT_138036
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
18870093
NCBI-ProteinID:
XP_007375701
JGI:
138036
UniProt:
G3AN11
LinkDB
All DBs
Position
Unknown
AA seq
682 aa
AA seq
DB search
MESDTEEDDKQYQQYEIRDGILFLIEITPDLLKSDSNLGSHSQLYEILSSINDLMSELII
TMKNTGIGIYFYNCSPSPVLKPMNQPPGFYKLFRLNVLNLQNMKRLNDIIQDSAINPVEG
LFKYKRMEDENHLSVVLNKIIDEFSSKTEFNRKKLIWITNNDKPYTETTTKDNLWRIVND
FYNYKLFIDPMFLSSGGKRFDTELYKDIFLNTNFLKPTQSQHDNEPTSKDSPVKSLLSSQ
IRQSIFRIKEVRRIQFSCDLILSDDGSVGGNFGCSIKGYTLYSHERYKKDLLLYTKEESI
KKVHSSSEIISDSGKINLPKDKAKSLQESKEAAGIRKGYEIGGGQDVIFLNKEQVDFINN
YAFDHRLIEKDEDGDEDDDDDDEDKTYIATSKPPYLKLLGFRDIQNFNPVYSCGSPIFIT
SDITTSTGYSNSLETLASLYRSCMKLQQYAIVFGCIKRNSSPYLYALYPTQTMNSTKLVE
GEEFPQGFLLIKLPWIEDVRSLPQDFIKEIHEEPDATLVDQFKSLFKKYELDSYDPKQFP
NPSLNYFYKVLKYEILQMELLPGERNLSSNDVTIQRLMELKQKFDSDDSAQYILNQINSR
LSELEERIPKRVISEDKPVKKAKVVELDESAVLVKWNQGKLNDFTMEQLKTFVKKYPQIK
VGSRKSETIENISRFLESREHK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaatccgacacagaagaagacgataaacagtatcaacagtatgagattagagatggg
atactctttcttattgaaatcacccctgatttattaaaatcagacagcaatctcggatcc
cattcgcaattgtatgaaattttatccagtataaatgacttgatgtcagaactaataatc
acgatgaaaaacaccggaattgggatatacttctacaattgtctgccgtctccagtgttg
aaacccatgaatcaacctcctggattctacaagcttttccgattgaatgtgctcaatttg
caaaatatgaaacgattaaacgacataattcaagatctggcaatcaaccccgtggaggga
ttattcaagtacaaacgcatggaagatgagaatcatttgtctgtggtgttgaacaaaata
attgacgaattttccagcaagactgaattcaataggaagaaactcatttggatcaccaat
aatgataaaccatacactgaaacaacaaccaaggacaatttatggagaatagtcaatgat
ttttacaactacaagctcttcatagaccccatgtttctttcctcgggtggcaaaagattc
gatactgaactatataaagatattttcctaaataccaatttcctaaagccgacccagtca
caacatgacaatgagccaacatccaaggattcacctgtgaaatccctcctttccagtcag
attaggcaatcaatctttcgtatcaaagaagtccgtcgtattcaattctcgtgtgacttg
atactcagcgatgacgggtctgtgggaggtaactttggatgttcaattaaagggtatacc
ctttacagccatgaaagatacaaaaaggacttgttgttgtatacaaaagaagaatcaatc
aaaaaagtccattcaagttcagaaataatatctgactctggaaaaattaacttacctaaa
gacaaggccaaatcacttcaagaaagtaaagaagcagccggtattagaaaagggtacgaa
atcggtggaggacaagatgtaatcttcttaaataaagaacaggttgactttataaacaat
tatgcttttgatcacagattaattgagaaagatgaagatggcgacgaagatgatgatgat
gatgatgaggataaaacttatatcgctacttcaaaaccaccttatttgaaattgcttgga
tttcgcgatatacaaaactttaatccggtttattcatgtggttcaccaatatttataact
agtgatataacaacatccactggttatagcaattcgctcgaaactttagcatcgttgtat
cgttcatgcatgaagcttcagcagtatgctattgtgtttgggtgtattaagcggaattca
ctgccttatttatacgcattgtatcctacccagaccatgaattcaacgaaattggttgaa
ggagaagagtttccccagggattccttttgattaaattaccttggattgaggatgtgcgt
tcattgcctcaagatttcatcaaagaaatacatgaagaacctgatgcgacattggttgac
caattcaaatcactattcaagaagtatgaacttgatagttatgaccccaaacaattcccg
aacccttcacttaattacttctacaaagttttaaaatatgaaattttacaaatggaatta
ttacccggtgaaagaaacttatcttcaaatgacgttactatacaaagattaatggaattg
aaacaaaaatttgactcggatgattctgctcaatatattcttaatcagataaactcaagg
ttgagtgagttggaagaaagaataccaaaaagagtgatttccgaggataaaccagtcaag
aaggcaaaagtggtggaattggatgagctggctgtattggttaaatggaaccaaggtaaa
ttgaacgattttaccatggaacaattgaagacatttgtcaagaaatatcctcagattaaa
gtgggatctagaaaatcagaaacaattgaaaatatttcgagattcttggaatcaagagaa
cataagtag
DBGET
integrated database retrieval system
