Spathaspora passalidarum: SPAPADRAFT_59562
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Entry
SPAPADRAFT_59562 CDS
T03101
Name
(RefSeq) hypothetical protein
KO
K03124
transcription initiation factor TFIIB
Organism
spaa
Spathaspora passalidarum
Pathway
spaa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
spaa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SPAPADRAFT_59562
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spaa03021
]
SPAPADRAFT_59562
Transcription machinery [BR:
spaa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SPAPADRAFT_59562
Prokaryotic type
Archaeal type
TFB
SPAPADRAFT_59562
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
TF_Zn_Ribbon
Cyclin_C
zf-ribbon_3
Trm112p
Trp_repressor
DUF1485
Motif
Other DBs
NCBI-GeneID:
18872973
NCBI-ProteinID:
XP_007373732
JGI:
59562
UniProt:
G3AHI4
LinkDB
All DBs
Position
Unknown
AA seq
342 aa
AA seq
DB search
MSTNTINSTYTGPNLNVTLVCPDCRQFPPDLVERFSEGDIICGNCGLVLSDRIVDTRSEW
RTFNNDDQNGDDPSRVGDSGNPLLDTEDLSTMISYVPQGGNRVGRDLTRIQQKSLVDKKN
NALNAAYIRIQELCNGYQLPKTVTDAAKHLYKAVREDKLLRGKSQDSIMAAVILLGCRRS
DVPRTLEEIRALTNVPSKQIAKVARLIKKIIHSHLVANPQSSILEETTSLTTHSAEDLIR
RFCSHLGLTPQVTNAAEHIARQCKDIGVLAGRSPTTIAAAAIYLAGKAFDVELTQQQIRD
KTGVSIGTIKTSYKVMYENKDKLLDPYWIESGKVKLDNIPKS
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtccactaatactataaatagcacatatactggtcccaatttgaacgtgaccttagtg
tgccctgattgtcgacaattcccacccgacttggtggaacggtttagtgaaggtgatata
atctgcggcaattgcggattggtacttagtgatagaatagtagacactcgttccgaatgg
agaactttcaataatgatgaccaaaatggtgacgatccttctcgtgtgggtgattcgggg
aatccacttttggacacagaagacttgtccactatgatctcatacgtgccgcaaggtggg
aatagagtaggaagagatttaactaggatccaacaaaagtcattggtggataaaaagaat
aatgccttgaatgcggcgtatatcaggatccaagaattgtgtaatgggtatcagcttcct
aaaacagtcacagatgctgcaaaacacctttacaaagcagtgagagaggacaagctactt
agagggaagtcccaggattcaataatggcagcagttatattacttgggtgcagaaggtca
gacgttcctagaacattagaagaaatccgtgcattgacaaatgtcccctcgaaacaaatc
gccaaagttgctagacttatcaagaaaatcattcattcgcatctagtggcaaacccacaa
tcctccattttggaagaaacaacaagtttgactacacattcagctgaagacttaatcaga
agattttgttctcacttgggcttgactcctcaagtcaccaacgcggctgaacatatcgcg
agacaatgcaaagacattggtgtactagcaggtagatcacctacgacaattgcagcagct
gcaatttaccttgcaggcaaagcatttgatgttgagttaacccaacagcaaattagagat
aaaactggggtaagtattggtacgataaagacgtcttataaagttatgtacgagaacaag
gacaagttattggatccatattggatagagtcgggaaaagttaaactagacaatattcct
aaaagttaa
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