Saccharomyces paradoxus: SPAR_G02960
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Entry
SPAR_G02960 CDS
T08193
Name
(RefSeq) Prp38
KO
K12851
pre-mRNA-splicing factor 38
Organism
spao
Saccharomyces paradoxus
Pathway
spao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAR_G02960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spao03041
]
SPAR_G02960
Spliceosome [BR:
spao03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
SPAR_G02960
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
54630690
NCBI-ProteinID:
XP_033766418
UniProt:
A0A8B8URP8
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Position
VII:complement(621422..622168)
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AA seq
248 aa
AA seq
DB search
MAINEFQVESHISPKQLNNQSVSLIIPRLTRDKIHNSMYYKVNLSNESMRGNTMVELLKV
IICALGTVKGLDGHLHMTVLGGIEFKCILMKLIEIRPNLQQLNFLLNVKNANNFDSKYII
ALLLVYVRLQYYYLNDNNNDNDEDGLIKLFKVQLYKYSQQYFKLKSFPLHVDCFAHSYNE
ELCIIHIDELIDWLVTQDHIWGIPLGKCQSWNKIYSSDEESSSSESESNSDSESDSDSED
DSGTGSES
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccatcaacgagtttcaagtggagtcccacatctctccaaaacagctgaataaccaa
tcggtatcgctgattattcctcggttgacaagagataaaattcataattcgatgtattat
aaagtcaatctaagcaacgaatctatgagaggcaatacaatggtagagcttctgaaagtt
attatttgtgcacttggcacagtaaaaggtctggatggccatttacacatgacggttctt
ggtggcatagagttcaagtgcatcttaatgaaactaattgaaataagaccaaatttgcag
cagttaaacttcttattgaacgtgaaaaatgcaaacaattttgattcgaaatacattatt
gctttacttctagtttatgtgcggttgcagtattattatttgaatgacaacaacaacgac
aatgatgaagatggtttgataaagttatttaaagtacaattatacaaatattcacagcaa
tatttcaaactgaaaagtttcccactgcatgtagactgctttgctcactcctataacgaa
gaactttgtataatacacattgatgaattaatcgactggttggtcacacaggaccatatc
tggggtattccattagggaaatgtcaatcttggaataaaatatacagctctgatgaagaa
agcagttcaagtgaaagcgaaagtaacagcgacagcgaaagtgacagtgacagcgaagat
gacagcggcaccggcagcgaatcataa
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