KEGG   Saccharomyces paradoxus: SPAR_G02960
Entry
SPAR_G02960       CDS       T08193                                 
Name
(RefSeq) Prp38
  KO
K12851  pre-mRNA-splicing factor 38
Organism
spao  Saccharomyces paradoxus
Pathway
spao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAR_G02960
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spao03041]
    SPAR_G02960
Spliceosome [BR:spao03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    SPAR_G02960
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 54630690
NCBI-ProteinID: XP_033766418
UniProt: A0A8B8URP8
LinkDB
Position
VII:complement(621422..622168)
AA seq 248 aa
MAINEFQVESHISPKQLNNQSVSLIIPRLTRDKIHNSMYYKVNLSNESMRGNTMVELLKV
IICALGTVKGLDGHLHMTVLGGIEFKCILMKLIEIRPNLQQLNFLLNVKNANNFDSKYII
ALLLVYVRLQYYYLNDNNNDNDEDGLIKLFKVQLYKYSQQYFKLKSFPLHVDCFAHSYNE
ELCIIHIDELIDWLVTQDHIWGIPLGKCQSWNKIYSSDEESSSSESESNSDSESDSDSED
DSGTGSES
NT seq 747 nt   +upstreamnt  +downstreamnt
atggccatcaacgagtttcaagtggagtcccacatctctccaaaacagctgaataaccaa
tcggtatcgctgattattcctcggttgacaagagataaaattcataattcgatgtattat
aaagtcaatctaagcaacgaatctatgagaggcaatacaatggtagagcttctgaaagtt
attatttgtgcacttggcacagtaaaaggtctggatggccatttacacatgacggttctt
ggtggcatagagttcaagtgcatcttaatgaaactaattgaaataagaccaaatttgcag
cagttaaacttcttattgaacgtgaaaaatgcaaacaattttgattcgaaatacattatt
gctttacttctagtttatgtgcggttgcagtattattatttgaatgacaacaacaacgac
aatgatgaagatggtttgataaagttatttaaagtacaattatacaaatattcacagcaa
tatttcaaactgaaaagtttcccactgcatgtagactgctttgctcactcctataacgaa
gaactttgtataatacacattgatgaattaatcgactggttggtcacacaggaccatatc
tggggtattccattagggaaatgtcaatcttggaataaaatatacagctctgatgaagaa
agcagttcaagtgaaagcgaaagtaacagcgacagcgaaagtgacagtgacagcgaagat
gacagcggcaccggcagcgaatcataa

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