Saccharomyces paradoxus: SPAR_L01680
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Entry
SPAR_L01680 CDS
T08193
Name
(RefSeq) Clf1
KO
K12869
crooked neck
Organism
spao
Saccharomyces paradoxus
Pathway
spao03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spao00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
SPAR_L01680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spao03041
]
SPAR_L01680
03036 Chromosome and associated proteins [BR:
spao03036
]
SPAR_L01680
Spliceosome [BR:
spao03041
]
Complex B
Other components
Prp19-related factors
SPAR_L01680
Complex C
SPAR_L01680
Chromosome and associated proteins [BR:
spao03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
SPAR_L01680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_14
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT
Suf
TPR_19
TPR_17
TPR_CcmH_CycH
U3_assoc_6
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
54632258
NCBI-ProteinID:
XP_033767889
UniProt:
A0A8B8UVU3
LinkDB
All DBs
Position
XII:complement(373504..375567)
Genome browser
AA seq
687 aa
AA seq
DB search
MDTLEPTTVDTHISAEQILRDVYKKGQKARGSTNIDILDVEELREYQRRKRTEYEGYLKR
NRLDMGQWIRYAQFEIEQHDMRRARSIFERALLVDSSFIPLWVRYIDAELKVKCVNHARN
LMNRAISTLPRVDKLWYKYLIVEESLNNIEIVRSLYTKWCSLEPGVNAWNSFVDFEVRQK
NWNGVREIYSKYVMVHPQVQTWLKWVKFENRHGNAEFTRSVYSLATDTVADLQKLHIWSD
AEVVKLVNSFAHWEATQQEYERSTALYRIAIEKWPSNQLLKGGLLDFEKQFGNINSIEET
ISYKRKMDYETTLNNNAYDYDTWWLYLDLVSESFPNQIMQTFEKAIVDSRPKGLSKTLHW
KRYVYLWMRYICYVELELENSLLEDELFQRLINDIIPHEHFTFSKIWLMYAKFLIRQDDV
PRARKILGRAIGLCPKSKTFKGYIELEVKLKEFDRVRKIYEKFIEFRPSDLQIWSQYAEL
EENLGDWDRVRGIYAIALDENSQFLTREAKIELLQKYITFETESQEFEEARKLYRSYLEL
NEYSVQSWIEFAMYQSSTPTEQQLSDLAKLQSENVDEDIEFEITDENKVEARKVFEEAVA
FFKDKDDKEGRLSILEALRDYEETYGTELDQETVGKKLPKVVKKVKLQDGVEEEFIDYVF
PDDIDDNKPKPSKFLELAKKWKKEQAP
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggacactttagaaccaactaccgtcgatacacatatttctgcggagcagattctgcgg
gatgtgtacaagaaggggcaaaaagcaagaggatcgactaatattgatatactagacgtg
gaagaacttcgagaataccagcgcaggaagagaacagagtatgaaggttatttgaagaga
aatagactggacatgggtcaatggatccgttatgcgcaattcgaaattgaacagcacgac
atgaggcgcgccagatccatctttgaaagagctttattagtagatagttcgttcatcccc
ctttgggtacgatacattgatgctgaactgaaagtaaaatgtgttaaccacgctaggaat
cttatgaacagagccattagtacgttgcccagagtagacaagttatggtacaagtacctc
attgtcgaagagtcgttaaacaatatcgaaattgtacgatcactatacaccaagtggtgc
tccttggagccaggcgttaatgcatggaattcctttgttgattttgaagtaagacagaaa
aactggaacggtgtaagagagatttattcgaaatacgtcatggttcatccacaagtgcag
acgtggctaaagtgggtcaagtttgaaaacagacatggtaatgctgaatttacaagaagt
gtttactctttagcgacagatacagtagctgaccttcaaaaattgcatatttggtctgat
gccgaggttgtaaaattagtaaattcatttgctcattgggaagctacgcagcaagaatac
gaaagatcgactgccctttatcgaattgctatagaaaaatggccttccaatcaattactt
aagggtggactgttagattttgaaaaacaattcggcaacataaactctatagaagaaact
attagctataagaggaaaatggactatgaaacaacactgaataataacgcctatgattat
gacacctggtggttatatttggatctcgtttcagaaagcttccccaaccaaataatgcaa
actttcgaaaaagctattgtggacagccgaccaaaaggactatcaaaaactcttcactgg
aaaaggtacgtttatctatggatgaggtatatatgctatgtggagttagaattggaaaat
tcacttttggaagatgaactttttcaaaggttaattaatgatattattcctcatgagcat
ttcacattttccaaaatatggctaatgtatgccaaatttctaatacgacaggatgatgtg
ccgagggcaagaaaaattttgggtagagctattggcttatgccccaaatctaaaaccttc
aaaggttacatcgagttggaagtgaagttgaaggaatttgatcgtgtgagaaaaatctat
gagaaatttattgaattccggccctctgacctacaaatttggtcacaatatgcagaatta
gaagaaaatttaggagattgggatagagtaagaggcatatatgcaatcgcgttagatgaa
aattcccagtttctaacaagggaagctaaaattgaattgcttcaaaaatacataacgttc
gagacagaatcacaagaattcgaagaggcaaggaagctttatagaagttatttggagttg
aacgaatattctgttcaaagctggatcgaatttgccatgtatcaaagttcaaccccgacg
gaacaacaactatcagacttagcaaaactgcaaagtgaaaatgtagatgaagatattgag
tttgaaattaccgatgaaaataaagtagaggcaagaaaagtctttgaagaagcagtggct
tttttcaaggacaaggatgataaagaagggaggctatctattttggaagcactgagagac
tatgaagaaacttatggtactgaactcgatcaagaaactgtcggaaagaagctccccaaa
gtcgtcaagaaggtaaagttacaggacggcgttgaagaggaatttatagactacgttttc
cctgatgatatcgacgataacaagccaaaaccatcaaagttcttggaattagccaaaaaa
tggaaaaaggaacaggcaccttga
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