KEGG   Saccharomyces paradoxus: SPAR_M03290
Entry
SPAR_M03290       CDS       T08193                                 
Name
(RefSeq) Cef1
  KO
K12860  pre-mRNA-splicing factor CDC5/CEF1
Organism
spao  Saccharomyces paradoxus
Pathway
spao03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spao00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    SPAR_M03290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:spao03041]
    SPAR_M03290
   03400 DNA repair and recombination proteins [BR:spao03400]
    SPAR_M03290
Spliceosome [BR:spao03041]
 Complex B
  Other components
   Prp19 complex
    SPAR_M03290
 Complex C
   Prp19-CDC5 complex
    SPAR_M03290
DNA repair and recombination proteins [BR:spao03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    SPAR_M03290
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_6 Myb_Cef Rap1_C
Other DBs
NCBI-GeneID: 54632906
NCBI-ProteinID: XP_033768516
UniProt: A0A8B8UXS9
LinkDB
Position
XIII:685370..687139
AA seq 589 aa
MAPVPIYVKGGVWTNVEDQILKAAVQKYGTHQWSKVASLLQKKTARQSELRWNEYLNPNL
NFTEFSKEEDAKLLDLARELPNQWRTIADMMARPAQVCVERYNRLLEGEDSGKAALSTGS
TDLKVGDINPNAETQMARPDNGDLEDEEKEMLAEARARLLNTQGKKATRKIRERMLEESK
RIAELQKRRELKQAGINVAIKKPKRKYGTDIDYNEDVVYEQAPMPGIYDISVEDRQIKKN
FEQFERKVNRKGLNGDEGKSSKKYKDKKRKRDENEYLEKAVLGESNVLTDEYKKPKLILS
APGTKQGKVTYKNELESKRRKLIQAQATGTVLTPNELPPHEPAQEDNERSNTKSNKKLKT
YIRKFLVQMFASLPSPKNNFEIVLSEDEEEEDAEIAEYQKEIENERAMNEEYNSIKPLSQ
KNTPLVSLVAVPLPNTALPIPEFKSNPQSVTDHKYNLLVANAINKETHMVPEATADFLKE
VESRMQHIIQAGTPTKIQLKRTMPPSQVILESIQSKVESIELLQSKLQHVKPLELQNNNL
CSTLCHHSLPALIEGQRKYYADYYAYQQEARTLESRKKRLQDVLDSSSI
NT seq 1770 nt   +upstreamnt  +downstreamnt
atggccccggtaccaatatacgtaaaagggggtgtatggacgaatgtggaggaccagatt
cttaaagcagccgtacaaaaatatggaactcatcagtggagcaaagtagcatcccttttg
caaaaaaaaactgccaggcagagtgaattaaggtggaatgaatatttaaatccaaacttg
aacttcacagagttttccaaggaggaagacgccaaacttttggatcttgcaagagaattg
cctaatcaatggaggaccattgctgatatgatggccaggcccgcacaggtctgcgtcgaa
aggtataataggctattagaaggtgaagacagcggtaaagctgcattaagcacaggatct
acagacttgaaagtcggagacatcaatcctaacgcagaaactcaaatggctcgaccagac
aatggtgatttggaagacgaggaaaaagaaatgcttgctgaagccagagctcgtctgtta
aatacccaaggtaagaaggctacaagaaagataagagagcggatgctcgaagaatcaaaa
cgaattgctgaattacaaaagagacgagaactgaagcaggcagggataaatgtcgccatt
aagaaaccgaagagaaaatatggcaccgacatcgattacaatgaagatgtcgtatatgag
caagctcccatgcccggcatatatgacatatccgttgaagaccgtcagataaaaaaaaat
tttgagcagtttgagagaaaagtcaacagaaaaggtttgaatggtgatgagggcaagtca
agtaaaaaatacaaggacaagaaaagaaaacgcgacgagaacgaatatcttgagaaagca
gtactgggtgaatccaatgtattgacggatgagtataagaaaccaaaacttatactatct
gcaccggggacgaaacagggaaaagtgacctataagaacgagctagaaagcaaaagacga
aagcttatccaggcacaagcaacaggcactgtgttgacaccaaacgaactgcctccccac
gaacccgcccaagaagataatgaacgcagtaacacaaaaagtaataaaaagctaaaaaca
tacatacgaaagtttttagtgcaaatgtttgcatctttaccgagtcccaagaacaatttc
gagattgtattgagtgaagacgaggaagaagaagacgcagaaatagcagaataccaaaaa
gaaattgaaaatgaaagagcgatgaatgaagaatataactccataaaaccactatctcaa
aaaaatacaccactcgtgtcattagtagccgtgccattacctaacacagcactacccata
ccagaattcaaaagcaacccgcagtcagtaacagaccataagtacaacttgttagtcgca
aacgctataaataaggaaactcacatggtaccagaagccacggcagatttcctgaaagag
gtggaatcgcgtatgcagcatataatccaagcgggcacgcccacgaaaatacaactcaaa
cgaacgatgcctccaagtcaggttattctggaatcaatccagtcaaaggtggagtccatc
gaactgttacagagcaaactacaacatgtgaaaccgctggaactacagaataacaatttg
tgcagcaccctctgccatcacagcctgcccgccttaattgaagggcaacggaaatactac
gctgattactacgcctaccagcaggaggcacgaacacttgagagtcgcaaaaaacgtctt
caagacgtgttggattcctcttccatatag

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