Saprolegnia parasitica: SPRG_04585
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Entry
SPRG_04585 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12590
exosome complex component RRP46
Organism
spar
Saprolegnia parasitica
Pathway
spar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPRG_04585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_04585
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SPRG_04585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
24127023
NCBI-ProteinID:
XP_012198388
UniProt:
A0A067CJ13
LinkDB
All DBs
Position
Unknown
AA seq
224 aa
AA seq
DB search
MPTPDRREDGRLVQEIRPLACEQGLLNRADGSARFNHGTTSVLASVSGPAAAKLRRQEKA
TGATLEVTFKAEKGAPSARDKEYEMILRETFEPIIVLENFPRAVVSITVQVVEDDGALLA
VAINAVNLALIDAGVPMRSIVGAITCSILEDGQLCLDPSRSEGETAAATVTTACCGNNDG
ILTSMTSGVLSEEQYFACSEICRRAIDSVLAFVRISQESKFNKA
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgccaacgccggatcgccgcgaggacggccgactggtccaagagatccgaccgctcgcc
tgcgagcaaggcctgctcaaccgcgccgatggctctgcgcgcttcaaccatggcacgacg
tcggtgctggcgtccgtctcgggccccgcggcggccaagctgcggcgccaggagaaggcg
acgggcgcgaccctcgaagtgacgttcaaggcggagaagggcgcgccgtctgcgcgcgac
aaggagtacgagatgattctgcgcgagacgttcgagcccatcatcgtgctcgagaacttt
ccccgtgccgtcgttagcatcacggtgcaggtcgtcgaggacgacggcgcacttctcgcc
gtggccatcaacgcagtcaacctcgcgctcatcgacgccggcgtgcccatgcgcagcatt
gttggcgcgatcacgtgctcgatcctagaagacggccagctgtgcttggacccgtcgcgc
tccgagggcgagacggcggcagccacggtcacaacggcgtgttgcggcaacaacgacggc
atcttgacctcgatgacgtccggcgtgctatcggaagagcagtactttgcctgctcggag
atctgccgacgagccatcgatagcgtcctcgcctttgtgcgtatttcccaggagagcaaa
ttcaacaaagcctaa
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