KEGG   Saprolegnia parasitica: SPRG_04585
Entry
SPRG_04585        CDS       T04137                                 
Name
(RefSeq) hypothetical protein
  KO
K12590  exosome complex component RRP46
Organism
spar  Saprolegnia parasitica
Pathway
spar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:spar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    SPRG_04585
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spar03019]
    SPRG_04585
Messenger RNA biogenesis [BR:spar03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     SPRG_04585
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 24127023
NCBI-ProteinID: XP_012198388
UniProt: A0A067CJ13
LinkDB
Position
Unknown
AA seq 224 aa
MPTPDRREDGRLVQEIRPLACEQGLLNRADGSARFNHGTTSVLASVSGPAAAKLRRQEKA
TGATLEVTFKAEKGAPSARDKEYEMILRETFEPIIVLENFPRAVVSITVQVVEDDGALLA
VAINAVNLALIDAGVPMRSIVGAITCSILEDGQLCLDPSRSEGETAAATVTTACCGNNDG
ILTSMTSGVLSEEQYFACSEICRRAIDSVLAFVRISQESKFNKA
NT seq 675 nt   +upstreamnt  +downstreamnt
atgccaacgccggatcgccgcgaggacggccgactggtccaagagatccgaccgctcgcc
tgcgagcaaggcctgctcaaccgcgccgatggctctgcgcgcttcaaccatggcacgacg
tcggtgctggcgtccgtctcgggccccgcggcggccaagctgcggcgccaggagaaggcg
acgggcgcgaccctcgaagtgacgttcaaggcggagaagggcgcgccgtctgcgcgcgac
aaggagtacgagatgattctgcgcgagacgttcgagcccatcatcgtgctcgagaacttt
ccccgtgccgtcgttagcatcacggtgcaggtcgtcgaggacgacggcgcacttctcgcc
gtggccatcaacgcagtcaacctcgcgctcatcgacgccggcgtgcccatgcgcagcatt
gttggcgcgatcacgtgctcgatcctagaagacggccagctgtgcttggacccgtcgcgc
tccgagggcgagacggcggcagccacggtcacaacggcgtgttgcggcaacaacgacggc
atcttgacctcgatgacgtccggcgtgctatcggaagagcagtactttgcctgctcggag
atctgccgacgagccatcgatagcgtcctcgcctttgtgcgtatttcccaggagagcaaa
ttcaacaaagcctaa

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