Saprolegnia parasitica: SPRG_10204
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Entry
SPRG_10204 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K11600
exosome complex component RRP41
Organism
spar
Saprolegnia parasitica
Pathway
spar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPRG_10204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_10204
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
SPRG_10204
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
SPRG_10204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
24132325
NCBI-ProteinID:
XP_012204552
UniProt:
A0A067CDT8
LinkDB
All DBs
Position
Unknown
AA seq
246 aa
AA seq
DB search
MKEFVSVAGLRVDGRRPNEVRRVRAKFGLFQRVDGSAYVEQGQTKVMAVVYGPKEHTGRK
TAEEAAQTKARVTCEVTQAPFATSERKVTHKADRKKLETSLAILQIFEANISTHLYPRSQ
IDIFVQVLHADGGELAACINAVTLALVDAGIAMKDFVVACSAGYIQQTLLCDLNQTEQNA
RCPDLAVALTPRNDKLTLVQMECKLPLEIFESLMTTAMEGCTQIYEILQNEVQENTWRRL
ISRETS
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagttcgtgagcgtcgcgggcctccgggtcgatggccgccggcccaacgaagtt
cgccgcgtccgcgccaagttcggtctcttccagcgcgtcgacggctctgcgtacgtcgag
cagggccagaccaaggtcatggcggtcgtctatggccccaaggagcacacggggcgcaag
actgccgaggaggcggcgcagaccaaggcgcgcgttacgtgcgaggtgacgcaggcgccg
ttcgcgacaagcgagcgcaaggtcacgcacaaggccgaccgcaagaagctcgaaacgtcg
ctcgcgattctccagatttttgaggccaacatctcgacccacttgtacccgcggtcccag
atcgacatttttgtccaagtgctccacgccgacggcggcgagctcgcagcgtgcatcaac
gcggtcacgctggcgctggtggatgccggcattgccatgaaggactttgtcgtggcctgc
tcggccggctacattcagcagacgcttctctgcgacttgaaccagacagagcaaaacgcc
cggtgccccgacctcgcggtcgccttgaccccgcgcaacgacaagctcacgctcgtgcaa
atggaatgcaagctgccgctcgagattttcgaatcgctcatgacgacagcgatggaaggc
tgcacgcaaatctacgagatcttgcagaacgaagttcaggaaaacacgtggcgccgcctc
atttcgcgcgagacgtcgtaa
DBGET
integrated database retrieval system
