Saprolegnia parasitica: SPRG_14077
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Entry
SPRG_14077 CDS
T04137
Name
(RefSeq) hypothetical protein
KO
K12600
superkiller protein 3
Organism
spar
Saprolegnia parasitica
Pathway
spar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SPRG_14077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spar03019
]
SPRG_14077
Messenger RNA biogenesis [BR:
spar03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
SPRG_14077
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_17
TPR_1
TPR_2
TPR_CcmH_CycH
TPR_19
DUF7017
TPR_8
TPR_14
TPR_12
Motif
Other DBs
NCBI-GeneID:
24135905
NCBI-ProteinID:
XP_012208424
UniProt:
A0A067C2S0
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MLKQYVTEAKAKLKDEAYEAALAASAKALELDGLNFQALLCMGKSHFHLHEPTKAVDAYK
RAAAIQADVPFAWKGMLEVYESTADHAKMLEPLEKLSAIVYANGKFDRCQKMLLDMAIAA
TLAKDYAKALASWHPLLVKEKARPELFAEENPNDELPPSVDMWLSVLDLVQAIPKTAGPF
QAPEAVLYALVGKIRAVATTTSGWVCSDKVAVVLDAYADLALTRLVQPQSTTKNLDRQTL
DAICRDMITWCPVAKRAAEILLLRAEDSDGALDATQKSTCESILRHVDPDNLLLMAIDGL
AMHAAKAYVPARETLTKCIAAGPHLLAARVALAEIAMVPGPTFQPQVCLDMIASAQDAVT
WRYDNLLTAPSLAILDETHLSLLSGAAYRALHKYADAIVCYEGILEHAPLLEAPAIGLAE
AYLAQRDVVLAANALQFLSEEPTSVALAAARGYLLYLQGDLDAARRLLEAGSALTGEALD
LACLKRRLADVYWDLDGEYRRDKAFCVSALLSAAKLNSFDAESFAGLGRWYLDIALDLVR
AEKCFLKALSLNPHCERAGTLLSGLYEAHDQEDRNVRLWTDMTMTADGVMAPIWALRRLA
QHQLNAHDEAAIASMHKVLRQAPSDASYWAALGHVYASFGRVMAAQKSYAKAVSLGMDTN
PSVLAELARIELSVGLFDEALAHLRTAAAHVVANDIAVRKLLAETLFQHAKFLCGQGLYG
RAAAHLCEASGLLQTCLETASNEPALHKLLGDVHCFAFYLAPGDFASWVDFLSAGTAAYK
TVSVMEPNEPAAWLDLGLGHWYEAMARGAVDGVPMGKLALQHAPVYPSSIDQLMHDASTA
FAQALALEPLNAHAWNAFGAVQRQIVLKHFGFVRAIQLANLDCAWANLGMLILQGVNPNN
PAMWTGYGLLEIEKGDASQAHAAYTCALQMRLDLDVLYGVASTGLQVSTTSKEALPLPQI
QFALQKYLERDPFEAAAQNAHGVVLSQLGLHAAAATAFDSVATTSAILQGNIVRNYIAAK
QWPEALAAWTVLETEDDTTKQLLAAQVSCANDIYTGLNRFGDAHAALQRIRSPASALHVA
LATYEAEFKASRSLSPASMAALQALMKVHPRHASIAATLARVELDWATYWTTSNGDDKDS
RDKESVPSDLCDAGLVPAWLDAVQRQDGSAVSIAALAHLVAASSAVTRPAATALPVSRHV
HAILDVFTVWTPPRATVQAWYRENPRDPNAWRALVLTLFKRYTATHDASILKTLGLYLKM
KKEAHLTWEWHVLMSGYCAWTHDATGAKTHAASASTLAASMPNASLYAARSVVFVDPAAA
LALYRTSLRGSADDVVLAEVAALVTALGWPKAAIRIWKGLHQLDDKWKFMAIVQRYVLSL
GVESPKVLAKYLKEIQNFVKDDAETSARAELVAQLVALTP
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagcagtacgtgaccgaggccaaggccaagctcaaggacgaggcctacgaggcc
gcgctcgcagccagcgccaaggccctcgagctcgacggactcaacttccaagcgctgctc
tgtatgggcaagagccacttccacttgcacgaaccgaccaaggccgtcgacgcctacaag
cgcgcagcggccatccaagccgacgtgccgtttgcctggaagggcatgctcgaagtctac
gagagcacggccgaccacgccaagatgctcgagcctctggagaagctctcggccatcgtt
tacgcgaatggcaagtttgatcggtgccagaagatgcttttggacatggcgatcgccgcg
acactcgccaaggactatgccaaggcgctcgcgtcctggcacccgctcctcgtcaaggaa
aaagcacgccccgagctcttcgccgaggagaacccgaacgacgagttgccgccaagcgtc
gacatgtggctctcggtgctcgatcttgtccaggcaattcccaagacagcaggcccgttc
caagcgccggaagctgtcttgtacgcactggtgggtaagatccgggccgtggcgacaacg
acctcgggctgggtgtgctcggacaaggtggcggttgtccttgacgcgtacgctgacctg
gcactcacgcggctcgttcaaccgcaatcgacaacaaagaacctcgatcgccagaccctc
gatgcgatctgccgcgatatgattacatggtgccccgtcgccaagcgcgcggccgagatt
ctcttgctgcgcgccgaagacagcgacggcgccctggatgcgacccaaaaaagcacgtgc
gagtccattttgcgccacgtcgacccggacaacctcctcctcatggccatcgacgggctt
gccatgcacgcagccaaagcctacgtcccggcgcgggagacgctgaccaagtgcatcgcg
gcgggtccgcacttgctggcggcgcgcgtcgccctggcggagattgcgatggtgccgggc
ccgacgttccaaccgcaggtctgcctcgacatgattgcgagcgcccaggacgcggtgacg
tggcgctatgacaacctcttgacggcgccgtcgctggccatcttggacgagacccacttg
agtttgctttcgggcgccgcgtaccgcgcgctccacaaatatgcggatgcgatcgtgtgc
tacgaaggcattttggagcacgcgccactgctcgaagcacccgcgattgggctcgcagaa
gcgtacttggcccagcgcgacgtggtgttggctgccaacgccctccagttcctcagtgag
gagccaacgtcggtcgcactcgcggccgcccgtggctatctcttgtacctccaaggcgac
ctcgacgctgctcgccgcctcctggaagcgggcagcgcgctcacgggcgaggccctcgac
ctcgcgtgcctcaagcgccggctcgccgacgtgtactgggacttggacggcgagtatcgg
cgcgacaaggcattttgcgtcagcgcactcctctcggcggccaaactcaattcgtttgac
gccgagagctttgccggcctcggtcgctggtacctcgacattgctttggacctcgtgcgc
gcggaaaagtgcttcttgaaagcgctctcgctcaacccgcactgcgagcgcgccggcacg
ctcctcagcggcctctacgaagcgcacgaccaagaagatcgcaacgtgcgtctctggacc
gacatgaccatgaccgccgacggcgtcatggcgccgatctgggcgttgcgccgtctggcc
cagcaccaattgaacgcccacgacgaagctgcgatcgcgtcgatgcacaaggtgctgcgt
caggccccgtccgatgcgtcctactgggctgccctcggccacgtgtatgcgagctttggc
cgtgtcatggccgcgcaaaagtcgtacgccaaagcggtgagtcttggcatggacaccaac
ccgtccgtcttggccgagctcgcgcggatcgagctctcggtcggcctctttgacgaagcg
ctcgcgcatctccgcaccgcggccgcgcacgtggtcgcgaacgacattgccgtgcgcaag
cttcttgcagagacgttgtttcagcacgccaagttcctctgcggccagggcctctacggc
cgcgcggccgcccatttgtgcgaagcctcgggcttgctccaaacgtgcttggagacggcg
agcaacgagcccgcgctgcacaagctccttggtgacgtgcactgcttcgccttctacttg
gcgcctggcgactttgcatcctgggtcgactttctcagcgctggcacggccgcgtacaaa
accgtgtcggttatggagcccaacgagcccgcggcgtggttggacctcggtcttggccat
tggtacgaagccatggcccggggcgcggtcgacggcgtgcccatgggcaagctcgcgctg
cagcacgccccggtgtacccctcgtcgatcgatcagctcatgcacgacgcgtcgaccgcg
tttgcgcaggcgcttgcactcgagccgctgaacgcacacgcgtggaatgcgttcggtgcg
gtgcaacgccagattgtgctcaagcactttggctttgtgcgcgcgatccagctcgcgaac
ttggactgcgcgtgggcaaacctcggcatgcttatcctccaaggcgtgaaccccaacaac
cccgccatgtggacgggctacggtcttctcgagatcgagaagggcgatgcgagccaagcc
cacgcagcgtacacgtgtgccctccagatgcgcctcgatttggacgtgctctacggcgtc
gcgtcgacgggccttcaagtgtcaacgaccagtaaagaggcgttgccgctgccgcagatc
cagtttgcgctgcaaaagtacctcgagcgcgacccgttcgaggcggcggcacagaacgcc
cacggcgtcgtgctctcgcagctcgggttgcacgccgcggcggccaccgcgttcgattcg
gtggcgacgacgtctgcgatcctgcaaggcaacattgttcgcaactacattgctgccaag
cagtggcccgaggcactggcggcgtggacggtcctcgagaccgaggacgacacgaccaag
cagctcttggcggcgcaggtctcgtgcgcgaacgatatctataccggtttgaaccgcttt
ggcgacgcgcacgcagcgctccagcgcattcggtcgccggcgtcggccctccatgtcgcc
ctcgccacgtacgaagccgagttcaaggcgtcgcgctcgctgtcgccagcctcgatggca
gcgctgcaggcgctcatgaaagtgcacccgcgccacgccagcatcgccgcgaccctcgca
cgcgtcgagctcgattgggcgacgtattggacaacgtccaacggcgacgacaaggacagc
cgcgacaaagagtcggtaccatcggacctgtgcgatgcggggcttgtgcccgcgtggctg
gacgcggtgcagagacaagacgggtcggcggtgtcgattgcggcgctggcgcaccttgtc
gccgcgtcgtcggcggtgacgcggccggccgcgacggcgctgcccgtgtctcgtcatgtg
cacgcgatcctcgatgtttttacagtgtggacgccgccgcgcgcgacagtccaagcctgg
taccgcgagaacccgcgcgatcccaacgcctggcgggcacttgtcttgacgctcttcaaa
cgctataccgcgacccacgacgcgtcgattctcaagaccctcggcctctacttgaagatg
aagaaggaggcgcatctcacgtgggagtggcatgtgctcatgagcggctactgcgcgtgg
acgcacgatgcgacgggcgccaagacgcacgcggcgtcggcgtcgacgctggcggcgtcg
atgccaaatgcgtcgttgtacgcagcgcgatcggtggtgtttgtggaccccgcggcagcc
ctcgcgctctaccgcacgtcgctgcgtggcagcgcggacgacgttgtgctggccgaggtc
gcggctcttgtgacagcgctggggtggccgaaagctgcgatccgtatctggaagggtctg
caccagctcgacgacaagtggaaatttatggcgatcgtccagcgctacgtgctctcgctc
ggcgtcgagtcgcccaaggtccttgccaagtacctgaaggaaatccagaatttcgtcaag
gacgacgccgagacgagtgcacgcgccgagctcgtcgcgcagctcgtggccttgacgccg
taa
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