Streptococcus pantholopis: A0O21_05910
Help
Entry
A0O21_05910 CDS
T05054
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
spat
Streptococcus pantholopis
Pathway
spat03410
Base excision repair
spat03430
Mismatch repair
spat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A0O21_05910
03430 Mismatch repair
A0O21_05910
03440 Homologous recombination
A0O21_05910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spat03400
]
A0O21_05910
DNA repair and recombination proteins [BR:
spat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A0O21_05910
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A0O21_05910
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A0O21_05910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AND79590
UniProt:
A0A172Q808
LinkDB
All DBs
Position
complement(1270401..1272605)
Genome browser
AA seq
734 aa
AA seq
DB search
MISAKYKWEIAVQEPDADFLKLAQKEKLSKEASTVLYRRGIDSAEKLKAFLSADLSDLYD
PYLLYDMEKSVGRIRQAIEKGESILIYGDYDADGMTASSVLKEALEMLGGDVQVYLPNRF
TDGYGPNQSVYKYFIEQEKVSLIITVDNGVAGHEALAYAKQQGIDVIVTDHHSIPDELPK
AYAIIHPQHPKSTYPFKDLAGCGVAFKLSCALLESVPAELLDLVAIGTIADMVSLTGENR
IMVRLGLQILKSGERFGLQELLRLSQADSGQVNEETVAFKLAPQLNALGRLDDPNPAVAL
LTGFDEEEAEDLALMIYQKNEERKEIVETIFREALQMVDKSQPVQVLAKSGWHPGVLGIV
AGRIVEELNQPAIVLNIEDGIAKGSARSVETVDIFQALTEHHNLFMAFGGHSGATGMTLE
ADKVQELAGALREYIAAKAIDLSQKKALQLDASLDLSALSLETVTSLTRLAPFGMDNKKP
VFHLTDFSVKQARTMGQKSQHLKLKIAQGKEEFDLVAFNRGNLLQEFQQAQNLELAVTLS
INQWNGQTSLQLMLEDARVEGIQLLDIRSNQTPLPSDVPILTADSHSKEVVLLDIPENPA
ELKALFAGKEFDVIYFKNRIKHQYYLTGYGTREQFAKLYKTIYRFPEFDIRYKLKELSGY
LKIPDILLVKMIQIFAELHFVAITDGVMTVNKEAEKHEITDSRIYQDLKKLVKLQELMAL
GTPQEMYAFLKEDD
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgatttcagcaaagtacaaatgggaaatcgctgttcaagaacctgatgctgattttttg
aagctggcgcaaaaagaaaagctaagcaaagaagccagcacagttctttatcggcgaggt
attgacagtgctgaaaaactgaaggcttttttaagcgctgatttgtcagacctttacgac
ccttatctgctttatgatatggaaaaaagtgtcggacggattcgccaggcaattgaaaag
ggagaatctatcctgatttatggggactatgatgctgacggcatgacagccagttctgta
ctcaaagaagctctggaaatgctgggaggcgatgttcaagtttatctgccgaaccgtttt
acagatggatacggtcccaaccaatcagtttataaatattttattgagcaggaaaaggtt
tctctgattattacagttgacaacggtgtggctggtcatgaggcccttgcatatgcaaag
cagcaaggaatcgatgtcattgtgaccgatcatcacagtatccctgatgagctgccgaaa
gcttatgccatcatccacccgcagcatcccaaaagcacctatccttttaaagatttggcc
ggctgcggtgtcgcttttaaattgtcctgtgccttgttggaatctgttccggcagaactt
ttggacttagttgctataggaactatagcagatatggtcagcctgactggtgaaaaccgt
attatggtaagactgggcctacagattttaaagtctggtgaacgctttggcctgcaggaa
ctcctgcgcttatcgcaggctgacagcggacaagtcaatgaagaaacagttgcttttaaa
ttagctcctcagctcaatgccctgggacgtttagatgatcccaatcctgctgtagcactt
ttaaccggtttcgatgaagaagaggcagaggatttagcgcttatgatttatcagaaaaat
gaagaacgaaaagagattgttgagacgatttttcgtgaagcgctgcaaatggtcgataaa
agtcagcctgttcaggttctggctaaatccggctggcatcccggagtcttgggtattgtg
gccggtcggatagtagaagagctaaatcagccggcaatagtccttaatattgaagacggt
atagctaagggcagtgccagaagtgtggagacagtcgatatttttcaagccctgacagag
catcacaatctttttatggcctttggcggccacagcggtgctaccggcatgaccttagag
gctgataaggttcaggagctggctggtgctttaagggaatatattgctgctaaagcgatt
gatctcagtcaaaaaaaggccttacagctcgatgcctctcttgatttatcagccttaagc
cttgaaacagtcaccagtctgaccagattggccccctttggtatggataataaaaagcct
gtttttcatttgactgatttttcagttaaacaggcacggacgatggggcaaaagagtcag
catttaaagcttaaaattgctcaaggcaaggaagagtttgaccttgtggcttttaataga
ggcaatctcctgcaggaatttcagcaggctcagaatttagagttggctgtgaccttatca
attaaccaatggaacggccagaccagcctgcagcttatgctggaggatgcaagagtagag
ggtattcagctgctggatattcgctcaaatcagaccccgctcccttctgatgttcctatt
ttgactgctgacagccacagcaaagaagtcgttctgctggatatacccgaaaatccagca
gaattaaaagctctttttgcaggtaaagagtttgatgtcatttattttaaaaatcgcata
aagcatcagtactacctgaccggctacggcactcgggaacaatttgctaagctttataag
acaatttaccgtttccctgaatttgatatccgctacaaattaaaagaattatctggctac
cttaaaatcccagatattcttctggttaaaatgattcagatttttgcggaactccatttt
gtagccatcacagacggtgtgatgactgtcaataaggaggcagaaaaacatgaaattact
gacagccgtatttatcaggacctaaaaaaacttgttaaacttcaggagctgatggcctta
ggaacgccgcaggaaatgtatgcctttttaaaggaagatgattaa
DBGET
integrated database retrieval system