Streptomyces parvulus: Spa2297_12045
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Entry
Spa2297_12045 CDS
T04685
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
spav
Streptomyces parvulus
Pathway
spav00040
Pentose and glucuronate interconversions
spav01100
Metabolic pathways
spav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Spa2297_12045
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Spa2297_12045
Enzymes [BR:
spav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
Spa2297_12045
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Gene cluster
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
ANJ07666
UniProt:
A0A191UY32
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Position
complement(2640636..2642198)
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AA seq
520 aa
AA seq
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MRRPVALRLQAALGTLALAAATGVVLAMPEAAAAAGGATGYATQNGGTTGGAGGQTVRAT
TGTAIHQALCGRADSATPITIEVEGTINHGNTSKVSGDSCSTAADKIELKQISNVTIVGV
GSGAVFDQLGIHIRESSNIIIQNVTVRNVRKSGSPTSNGGDAIGMESGVRNVWVDHTTLE
ASGGESAGFDGLFDMKDNTQYVTLSYSVLRNSGRGGLIGSSESDRSNGYVTFHHNKYENI
DSRSPLLRGGTSHIYNNHYASLNESGINSRAGAKAKVDSNYFEDSKDVLGTFYTDQAGYW
QVAGNIFDNVTWSEPGDDTNPAGPDPRSNTTVSIPYSYALDDASCVPAVVAATAGANKGL
KVSDGSCAPQNPDPTPTDPDPTDPTEPSPDPTDPTDPPSGTNLSLGAGADGSSKASGTSY
GNVRDGDPATHWSPAGTTGSVSVKWPSPTTVSKVRVREVAGSEGAIRSYRLVDHGTGRVL
ATGTGAGVAGFPAVSLTKLTLEITGASGTPKVAEFETYAG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagaagacccgtcgcgctgcgactccaggcggcgctgggcacactggccctcgccgcc
gcgaccggggtggtgctggccatgcccgaggcggcggccgcggccggtggcgccaccggc
tacgcgacccagaacggcggcacgaccggcggcgcgggcgggcagacggtccgggccacc
accggcaccgccatccaccaggccctgtgcggccgggcggacagcgccaccccgatcacc
atcgaggtcgagggcaccatcaaccacggcaacaccagcaaggtgtccggcgacagctgc
agcaccgccgccgacaagatcgagctgaagcagatcagcaacgtcacgatcgtcggggtc
ggcagcggcgccgtcttcgaccaactgggcatccacatccgggagtccagcaacatcatc
atccagaacgtgacggtccggaacgtcaggaagtcgggctcgcccacctccaacggcggc
gacgccatcggcatggagagcggcgtccgcaacgtctgggtcgaccacaccacgctggag
gcctcgggcggcgagtcggcgggcttcgacggcctcttcgacatgaaggacaacacccag
tacgtgaccctgtcctacagcgtcctgcgcaactccggccgcggcggtctcatcggctcc
agcgagagcgaccggtccaacgggtacgtcaccttccaccacaacaagtacgagaacatc
gactcccgcagccccctgctgcgcggcggcacctcgcacatctacaacaaccactacgcg
agcctcaacgagtccggcatcaactcccgcgccggcgccaaggccaaggtggacagcaac
tacttcgaggactccaaggacgtcctcggcaccttctacaccgaccaggccggctactgg
caggtcgccggcaacatcttcgacaacgtcacctggtccgagcccggcgacgacaccaac
ccggcaggacccgacccgcgctccaacaccaccgtctccatcccgtactcctacgccctg
gacgacgcctcctgcgtgccggcggtggtcgccgccacggcgggcgcgaacaagggcctc
aaggtgtcggacggcagctgcgcaccgcagaaccccgacccgacccccaccgacccggat
ccgacggacccgaccgagccgtccccggacccgaccgacccgaccgacccgccgagcggc
accaacctcagcctcggcgcgggcgccgacggctcgtccaaggcgagcggcaccagctac
ggcaacgtgcgcgacggcgacccggccacccactggtcgccggccgggacgaccggctcg
gtctccgtcaagtggccgtccccgaccaccgtgtccaaggtccgcgtcagggaggtggcg
ggctccgagggcgccatccggtcgtaccggctggtcgaccacggcaccggcagggtcctc
gccaccggaaccggcgccggcgtggccggcttcccggcggtctccctgacgaagctcacc
ctggagatcaccggcgcctcgggcaccccgaaggtcgccgagttcgagacgtacgccggg
tag
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