Sphingobium sp. CAP-1: GL174_16160
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Entry
GL174_16160 CDS
T10467
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
spca Sphingobium sp. CAP-1
Pathway
spca01501
beta-Lactam resistance
spca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
spca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GL174_16160
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GL174_16160
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spca02000
]
GL174_16160
01504 Antimicrobial resistance genes [BR:
spca01504
]
GL174_16160
Transporters [BR:
spca02000
]
Other transporters
Pores ion channels [TC:
1
]
GL174_16160
Antimicrobial resistance genes [BR:
spca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
GL174_16160
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
GL174_16160
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
GL174_16160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
TPR_MLP1_2
CENP-F_leu_zip
GCN5L1
Motif
Other DBs
NCBI-ProteinID:
QGP80645
LinkDB
All DBs
Position
MIN2:complement(374088..375491)
Genome browser
AA seq
467 aa
AA seq
DB search
MPAKRARAAGLATIILLGGCSMAPTYQPPQIAAPAAYKEAAGWTDATPMDAVSRGAWWEA
YGDPVLNDLEARAEAASPTLAAALARYDQALARAQVEASDLLPTAGVDASGVRRRVSGNR
FQGNGRAITYDDYVVGGTLDYELDLWGRIRNSVKAARAGAQASEADLASARLSLQAAVAD
AYVRLRELDAQADLLQRTVAAFERAYQLTSTRHEGGIASGIDVNRARTTLGNAKARISAI
ASQRAATEHELAALTGTVASGFAIAPQVRTLAAPDLPMGAPSTLLQRRPDIAAAERRMFA
ANAQIGVARAAFFPTLSLGLTGGWEATHGDLLRAPNAFWGLGPLASALTLFDAGRRKAQV
RLSRAQYEEEAADYRDTVLGAFRQVEDSVAAVRHLSAQLVDQRDAAQAAQRTSDIAFTRY
RDGASDYLEVVTAQTDALDAQSALLSAQFDRARAGIALVKALGGPSA
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgccggctaagcgcgcgcgcgccgcaggactggcgacgatcatattgcttggtggctgt
tcgatggcgcccacctatcaaccgccacagatcgccgcgccggcagcctataaggaagcc
gccggatggaccgacgcgacgccaatggacgcggtatcgcgcggagcgtggtgggaagcc
tatggcgatccggtgctgaacgatctggaagcgcgcgccgaggccgccagcccgacactc
gcggcggcgctcgcccgctacgatcaggcgctggcacgcgcgcaggtggaggcgtcggac
ctactgccgacggccggcgtcgatgcgagcggcgttcggcggcgggtgtcgggcaatcgc
ttccagggcaatggccgcgccatcacctatgacgattatgtggtcggcgggacgctggac
tatgaactggacctgtggggccgcatccgcaacagcgtgaaagccgcgcgggccggcgcg
caggcgagcgaggccgacctggcgtctgcgcggctcagcttgcaggcggcggttgccgac
gcctatgtccggctgcgcgagctggacgcgcaggccgatctgctccagcgcaccgtcgcc
gccttcgagcgggcctatcaactgaccagcacacgccatgagggcggcatcgcgtcgggg
atcgatgtcaatcgcgcgcgcaccacgctcggcaacgcgaaggcgcgcatctccgccatc
gccagccagcgcgccgcgaccgagcatgaactggcggcgctgaccggaacggtggcatcc
ggctttgcgatcgcgccgcaggtacggacgctggcggcgccggatctgccgatgggggcg
ccctccaccctgttgcagcgacggccggatatcgccgctgccgaacggcgcatgttcgcc
gccaatgcgcagatcggggtagcgcgcgccgccttcttccccacgctctcgctggggctg
accggcggctgggaggcgacgcatggcgacctgttgcgcgcgcccaacgccttttggggg
ctgggaccgctggcgtcggcgctgaccctgttcgacgccggccggcgcaaggcgcaggtc
aggctgtcgcgcgcccaatatgaggaagaggccgccgactatcgcgacaccgtgctgggc
gcgttccggcaggtggaggatagcgtcgcggcggtgcggcacctgtcagcgcaactggtc
gaccagcgcgacgcggcgcaggcggcgcagcgcaccagcgacatcgccttcacccgctat
cgcgatggcgcgtccgactatctggaggtcgtcaccgcccagaccgacgcgctcgacgcg
caaagcgcgctgctgagcgcgcagttcgatcgcgcccgcgccggcatcgctctggtcaag
gcgctgggcgggccatccgcttaa
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